Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DOAP06340 MIR548AR-201ENST00000582191 57 ntBASIC1.87□□□□□ -2.11
HLA-DOAP06340 AL513423.1-201ENST00000621695 132 ntBASIC1.87□□□□□ -2.11
HLA-DOAP06340 RNU6-1190P-201ENST00000410811 104 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 RNU2-11P-201ENST00000459191 187 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 Y_RNA.676-201ENST00000516393 96 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 FAM106DP-201ENST00000586416 501 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 AC078899.2-201ENST00000595282 212 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 AL645939.4-201ENST00000604495 135 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 AL035470.1-201ENST00000622571 220 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
HLA-DOAP06340 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DOAP06340 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-34-201ENST00000362441 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-12-201ENST00000362583 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-29-201ENST00000362834 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-9-201ENST00000362912 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-21-201ENST00000362963 81 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-14-201ENST00000363090 81 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-13-201ENST00000363358 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-41-201ENST00000363608 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-11-201ENST00000363616 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-5-201ENST00000363633 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-39-201ENST00000363694 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-4-201ENST00000363810 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-16-201ENST00000363887 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-6-201ENST00000363942 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-42-201ENST00000364273 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-15-201ENST00000364809 81 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 Y_RNA.298-201ENST00000364960 107 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-1-201ENST00000364961 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-26-201ENST00000365067 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-10-201ENST00000365073 81 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-43-201ENST00000365503 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-36-201ENST00000365629 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 MIR452-201ENST00000385020 85 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HLA-DOAP06340 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 RNU7-164P-201ENST00000459221 62 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD123-201ENST00000459473 70 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 RPS29P24-201ENST00000486345 171 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 RNU6-998P-201ENST00000515894 101 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 RNU6-917P-201ENST00000516294 104 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 RNU6-958P-201ENST00000516995 106 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 SNORD115-40-201ENST00000606510 82 ntBASIC1.85□□□□□ -2.11
HLA-DOAP06340 AC008555.8-201ENST00000623602 2168 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 AL596028.1-201ENST00000326971 197 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 Y_RNA.370-201ENST00000365589 108 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 RNU6-147P-201ENST00000383983 107 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 RNA5SP136-201ENST00000410906 107 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 RPL23AP6-201ENST00000446637 472 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DOAP06340 RNU7-95P-201ENST00000459222 64 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 RNU7-80P-201ENST00000459562 61 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 AC007012.1-201ENST00000567192 175 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 uc_338.28-201ENST00000612082 187 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
HLA-DOAP06340 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DOAP06340 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
HLA-DOAP06340 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DOAP06340 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DOAP06340 RNU6-880P-201ENST00000384526 107 ntBASIC1.83□□□□□ -2.12
HLA-DOAP06340 AL512326.2-201ENST00000426359 151 ntBASIC1.83□□□□□ -2.12
HLA-DOAP06340 RNU6-1258P-201ENST00000516911 111 ntBASIC1.83□□□□□ -2.12
HLA-DOAP06340 SNORA31.24-201ENST00000517232 57 ntBASIC1.83□□□□□ -2.12
HLA-DOAP06340 MIR4305-201ENST00000583252 102 ntBASIC1.83□□□□□ -2.12
HLA-DOAP06340 MIR450A1-201ENST00000362262 91 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 Y_RNA.4-201ENST00000362333 112 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 RNU6-755P-201ENST00000364400 103 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 MIR194-1-201ENST00000384892 85 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 MIR17-201ENST00000385012 84 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 RNU6-913P-201ENST00000390913 95 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 AC004965.1-201ENST00000413033 213 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DOAP06340 AL035398.1-201ENST00000430869 322 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 COX6CP6-201ENST00000490840 228 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 AC022254.1-201ENST00000567857 235 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 AL513534.2-201ENST00000603836 250 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.82□□□□□ -2.12
HLA-DOAP06340 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DOAP06340 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HLA-DOAP06340 MIR302B-201ENST00000362188 73 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 SNORA63.5-201ENST00000363548 123 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 RNU6-414P-201ENST00000363705 104 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 Y_RNA.171-201ENST00000363760 102 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 MIR1323-201ENST00000408090 73 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 HMGN1P33-201ENST00000432945 451 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 AC009474.2-201ENST00000451383 136 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 RNU7-67P-201ENST00000459003 62 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 RNU7-96P-201ENST00000459535 64 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 RNU2-13P-201ENST00000515909 113 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 MIR4791-201ENST00000607666 84 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 AC021613.1-201ENST00000623880 111 ntBASIC1.81□□□□□ -2.12
HLA-DOAP06340 MIR203B-201ENST00000636080 86 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms