Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 RNU7-55P-201ENST00000459426 62 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 RNU6-155P-201ENST00000516347 100 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 SNORD36C-201ENST00000516733 66 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 RNU6-256P-201ENST00000516747 97 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.3□□□□□ -2.62
TFF1P04155 MIR4662B-201ENST00000579498 81 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 MIR548H5-201ENST00000580314 60 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 RNU7-10P-201ENST00000607194 63 ntBASIC-1.3□□□□□ -2.62
TFF1P04155 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 RNU6-842P-201ENST00000384269 107 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
TFF1P04155 SNORA36B-201ENST00000410438 131 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 AL160004.2-201ENST00000432935 350 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.31□□□□□ -2.62
TFF1P04155 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 RNU6-126P-201ENST00000516685 103 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 RNU7-149P-201ENST00000516739 59 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.31□□□□□ -2.62
TFF1P04155 MIR3672-201ENST00000584290 82 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 AC005014.2-201ENST00000607795 599 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 AC027449.1-201ENST00000608890 407 ntBASIC-1.31□□□□□ -2.62
TFF1P04155 RNU6-553P-201ENST00000364047 96 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 SNORD116-11-201ENST00000383882 92 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 RNY3P10-201ENST00000384764 102 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 HLA-S-202ENST00000425174 53 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 AC093423.1-201ENST00000440817 142 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.32□□□□□ -2.62
TFF1P04155 MIR3920-201ENST00000581751 86 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 AC068137.3-201ENST00000639191 341 ntBASIC-1.32□□□□□ -2.62
TFF1P04155 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 RNU6-888P-201ENST00000363010 101 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 MIR1278-201ENST00000408753 81 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 AC097635.1-201ENST00000450678 155 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 ZNF519P2-201ENST00000557032 169 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.33□□□□□ -2.62
TFF1P04155 AC122108.2-201ENST00000611946 526 ntBASIC-1.33□□□□□ -2.62
TFF1P04155 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 SNORD115-44-201ENST00000365391 82 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 RNU6-831P-201ENST00000384548 107 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 MIR519A1-201ENST00000385257 85 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 MTND2P39-201ENST00000457230 764 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 RNU7-87P-201ENST00000459343 62 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.34□□□□□ -2.62
TFF1P04155 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 MIR518B-201ENST00000385127 83 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 AL590004.1-201ENST00000405321 300 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 RNU6-721P-201ENST00000410155 105 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 AC023449.1-201ENST00000454464 154 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 AC107027.2-201ENST00000512197 115 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 AC005357.1-201ENST00000588399 301 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 AC024933.1-201ENST00000608472 348 ntBASIC-1.35□□□□□ -2.63
TFF1P04155 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 SNORD115-47-201ENST00000391226 86 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 MTND1P27-201ENST00000451117 902 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 DEFB131E-201ENST00000532329 154 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 MTND5P40-201ENST00000559945 246 ntBASIC-1.36□□□□□ -2.63
TFF1P04155 MTND5P18-201ENST00000445624 1801 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 RNA5SP133-201ENST00000363368 119 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 SNORD74.6-201ENST00000364796 70 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 RNU6-20P-201ENST00000384106 107 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.37□□□□□ -2.63
TFF1P04155 AC024067.1-201ENST00000426199 223 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 MTND1P2-201ENST00000430604 821 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 SNORD77.4-201ENST00000516158 81 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 RNU6-232P-201ENST00000517144 64 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 AC026421.1-201ENST00000519101 163 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 AP003733.2-201ENST00000529409 171 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
TFF1P04155 MIR3179-1-201ENST00000578940 84 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 MIR3179-2-201ENST00000579107 84 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 MIR3179-3-201ENST00000579566 84 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 AC138207.3-201ENST00000585289 166 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 RN7SKP299-201ENST00000606679 301 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 AC098479.1-201ENST00000609225 154 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 AC011603.4-201ENST00000611325 277 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.37□□□□□ -2.63
TFF1P04155 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 MIR3179-4-201ENST00000617599 84 ntBASIC-1.37□□□□□ -2.63
TFF1P04155 RNU6-901P-201ENST00000384593 106 ntBASIC-1.38□□□□□ -2.63
TFF1P04155 RNU6-306P-201ENST00000384617 107 ntBASIC-1.38□□□□□ -2.63
TFF1P04155 RNY4P36-201ENST00000391116 96 ntBASIC-1.38□□□□□ -2.63
TFF1P04155 AL445193.1-201ENST00000441183 141 ntBASIC-1.38□□□□□ -2.63
TFF1P04155 SCARNA18B-201ENST00000458806 135 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms