Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL365205.2-201ENST00000594586 68 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 MIR8055-201ENST00000610739 97 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 AC091895.1-201ENST00000624494 256 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 MIR342-201ENST00000362212 99 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 Y_RNA.552-201ENST00000384665 112 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 AC244023.1-201ENST00000426884 112 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 RNU7-73P-201ENST00000458743 63 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 RNU6-998P-201ENST00000515894 101 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 RNA5SP458-201ENST00000516188 119 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 SNORD116-25-201ENST00000516517 92 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 MIR5197-201ENST00000583721 112 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 MIR4781-201ENST00000585250 76 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 AC242498.1-201ENST00000604134 111 ntBASIC0.82□□□□□ -2.28
MT-ND1P03886 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
MT-ND1P03886 RNU6-200P-201ENST00000364743 107 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 RNU6-1292P-201ENST00000383856 107 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 Y_RNA.515-201ENST00000384535 112 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 Y_RNA.542-201ENST00000384641 111 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 RNU6-613P-201ENST00000410412 108 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 RNU2-11P-201ENST00000459191 187 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 AC005840.1-201ENST00000498412 377 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 MIR4431-201ENST00000579990 94 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 MIR4298-201ENST00000584380 73 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.81□□□□□ -2.28
MT-ND1P03886 Y_RNA.257-201ENST00000364596 102 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 RNU6-392P-201ENST00000364926 101 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 RNU6-396P-201ENST00000365369 105 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 Y_RNA.351-201ENST00000365436 96 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 SEPT7P4-201ENST00000437076 306 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 RNU7-45P-201ENST00000459460 63 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
MT-ND1P03886 RNU6-94P-201ENST00000607728 107 ntBASIC0.8□□□□□ -2.28
MT-ND1P03886 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
MT-ND1P03886 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.79□□□□□ -2.28
MT-ND1P03886 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 RNU6-312P-201ENST00000364629 107 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 RNU6-768P-201ENST00000384683 107 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 RNU6-205P-201ENST00000390858 107 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 RNU5E-9P-201ENST00000411164 104 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 snoU13.21-201ENST00000459368 105 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 RNU7-96P-201ENST00000459535 64 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.79□□□□□ -2.28
MT-ND1P03886 MIR2115-201ENST00000516657 100 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 SCARNA15-202ENST00000516881 127 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 AP002392.1-201ENST00000537692 208 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 MIR4769-201ENST00000584126 77 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 Z97988.1-201ENST00000637697 135 ntBASIC0.79□□□□□ -2.28
MT-ND1P03886 RNU6-682P-201ENST00000363843 106 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 SNORD113.3-201ENST00000364630 78 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 RNU6-580P-201ENST00000365159 107 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 SNORA2B-201ENST00000384583 137 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 SNORA26.6-201ENST00000391256 115 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 Y_RNA.793-201ENST00000411222 111 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 RPS3AP1-201ENST00000413190 320 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.78□□□□□ -2.28
MT-ND1P03886 RNU7-53P-201ENST00000516705 60 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 RNU6-861P-201ENST00000516745 106 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 AC072026.1-201ENST00000605023 201 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 AL359821.1-201ENST00000605519 182 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 uc_338.6-201ENST00000613544 171 ntBASIC0.78□□□□□ -2.28
MT-ND1P03886 RNU6-1082P-201ENST00000364574 107 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 RNU6-597P-201ENST00000365620 102 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 MIR624-201ENST00000385217 97 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 MIR548I3-201ENST00000408378 149 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 RNA5SP127-201ENST00000411051 133 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 RNU6-602P-201ENST00000411155 105 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 RNU7-120P-201ENST00000459334 63 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.77□□□□□ -2.29
MT-ND1P03886 AC091932.4-201ENST00000623386 200 ntBASIC0.77□□□□□ -2.29
MT-ND1P03886 MTND5P32-201ENST00000560711 1802 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 Y_RNA.168-201ENST00000363740 102 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 RNY1P11-201ENST00000363759 113 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 Y_RNA.521-201ENST00000384560 114 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 MT-TN-201ENST00000387400 73 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 SNORD111-201ENST00000408139 94 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
MT-ND1P03886 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 RNU6-1149P-201ENST00000516810 97 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 SNORA81.3-201ENST00000517283 198 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 AC004792.1-201ENST00000614523 137 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms