Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL356055.1-201ENST00000602528 446 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AL080274.1-201ENST00000605565 220 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AC024933.1-201ENST00000608472 348 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MIR342-201ENST00000362212 99 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 MIR148A-201ENST00000362215 68 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 SNORD115-28-201ENST00000363931 81 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 RNU6-259P-201ENST00000383999 107 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 RNU6-908P-201ENST00000410160 94 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 RNU6-373P-201ENST00000411247 98 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 RNU6-938P-201ENST00000411285 103 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 RPL30P15-201ENST00000457129 321 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.41□□□□□ -2.47
COL1A1P02452 DEFB131E-201ENST00000532329 154 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 AC127455.1-201ENST00000565496 145 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 AC006362.1-201ENST00000567392 174 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 MIR4324-201ENST00000584846 72 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 AP000942.4-201ENST00000604811 241 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 AC022441.3-201ENST00000605737 136 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 AC092794.2-201ENST00000620933 563 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 AL359880.1-201ENST00000621879 266 ntBASIC-0.41□□□□□ -2.47
COL1A1P02452 MTND5P26-201ENST00000426018 1752 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 SNORD114-14-201ENST00000362723 75 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNY4P6-201ENST00000363667 96 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNU4-50P-201ENST00000364361 141 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 SNORD115-44-201ENST00000365391 82 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 SNORA27-201ENST00000384323 126 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 SNORD64-201ENST00000386683 67 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 SNORA69.1-201ENST00000390904 137 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 MIR8485-201ENST00000401372 91 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 MIR548O-201ENST00000408583 114 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 snoU13.13-201ENST00000458842 104 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNU6-437P-201ENST00000459408 95 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.41□□□□□ -2.48
COL1A1P02452 SNORA25.13-201ENST00000516395 103 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNA5SP461-201ENST00000516451 104 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNA5SP470-201ENST00000516463 106 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNU6-881P-201ENST00000516813 102 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 RNU6-765P-201ENST00000516916 99 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 uc_338.19-201ENST00000616808 99 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 AC093726.3-201ENST00000637588 150 ntBASIC-0.41□□□□□ -2.48
COL1A1P02452 MTND5P18-201ENST00000445624 1801 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 RNY3P3-201ENST00000363816 102 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 RNU6-431P-201ENST00000383874 107 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 RNY1P7-201ENST00000384743 110 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 MIR181B2-201ENST00000385004 89 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 MIR626-201ENST00000385032 94 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 SNORD77.3-201ENST00000391113 65 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 SNORA36B-201ENST00000410438 131 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 SCARNA17-201ENST00000516183 144 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 MIR548AY-201ENST00000617669 107 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.42□□□□□ -2.48
COL1A1P02452 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 MIR539-201ENST00000365690 78 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 RNU6-47P-201ENST00000383866 107 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 RNU6-905P-201ENST00000384434 107 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 RNU6-901P-201ENST00000384593 106 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 DEFB108C-201ENST00000400154 252 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 MIR1285-2-201ENST00000408311 88 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 RNA5SP237-201ENST00000410414 113 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 AC098614.3-201ENST00000438957 440 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 AP000533.3-201ENST00000447704 118 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 RNU7-134P-201ENST00000458997 64 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 SNORD11-201ENST00000459124 84 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 RPS29P24-201ENST00000486345 171 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 AC019235.1-201ENST00000503847 207 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 AC097510.1-201ENST00000510945 133 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 SNORD22.1-201ENST00000516331 125 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 SNORD36C-201ENST00000516733 66 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 MTND3P12-201ENST00000559068 328 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 AL662814.1-201ENST00000617364 121 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 MIR1321-201ENST00000637766 79 ntBASIC-0.43□□□□□ -2.48
COL1A1P02452 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 SNORD115-2-201ENST00000362842 82 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 AF228730.4-201ENST00000421457 183 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL1A1P02452 RNU2-11P-201ENST00000459191 187 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 AC091951.2-201ENST00000500762 203 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL1A1P02452 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms