Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL161935.2-201ENST00000414627 60 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNU5E-3P-201ENST00000515913 68 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RN7SKP19-201ENST00000516016 252 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNA5SP220-201ENST00000516298 104 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNU6-1061P-201ENST00000516530 99 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNA5SP168-201ENST00000516642 112 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNA5SP102-201ENST00000516865 106 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNU6-1116P-201ENST00000517269 99 ntBASIC1.48□□□□□ -2.17
LDLRP01130 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.48□□□□□ -2.17
LDLRP01130 AC133485.4-201ENST00000561835 220 ntBASIC1.48□□□□□ -2.17
LDLRP01130 AC138907.4-201ENST00000570107 226 ntBASIC1.48□□□□□ -2.17
LDLRP01130 MIR4778-201ENST00000577635 80 ntBASIC1.48□□□□□ -2.17
LDLRP01130 AC087685.1-201ENST00000587507 141 ntBASIC1.48□□□□□ -2.17
LDLRP01130 AL078603.1-201ENST00000603824 313 ntBASIC1.48□□□□□ -2.17
LDLRP01130 AC006441.5-201ENST00000612680 209 ntBASIC1.48□□□□□ -2.17
LDLRP01130 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
LDLRP01130 SNORD3E-202ENST00000627253 216 ntBASIC1.48□□□□□ -2.17
LDLRP01130 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LDLRP01130 RNU6-268P-201ENST00000364174 107 ntBASIC1.47□□□□□ -2.17
LDLRP01130 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
LDLRP01130 RNA5SP259-201ENST00000365541 109 ntBASIC1.47□□□□□ -2.17
LDLRP01130 MIR513A1-201ENST00000385138 129 ntBASIC1.47□□□□□ -2.17
LDLRP01130 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
LDLRP01130 RNU6-938P-201ENST00000411285 103 ntBASIC1.47□□□□□ -2.17
LDLRP01130 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.47□□□□□ -2.17
LDLRP01130 AC063976.4-201ENST00000421971 163 ntBASIC1.47□□□□□ -2.17
LDLRP01130 SNRPGP13-201ENST00000442212 177 ntBASIC1.47□□□□□ -2.17
LDLRP01130 RNU6-1149P-201ENST00000516810 97 ntBASIC1.47□□□□□ -2.17
LDLRP01130 MTND5P34-201ENST00000568888 325 ntBASIC1.47□□□□□ -2.17
LDLRP01130 U6.95-201ENST00000636931 70 ntBASIC1.47□□□□□ -2.17
LDLRP01130 MIRLET7C-201ENST00000362160 84 ntBASIC1.46□□□□□ -2.18
LDLRP01130 RNU6-647P-201ENST00000364243 107 ntBASIC1.46□□□□□ -2.18
LDLRP01130 RNU6-755P-201ENST00000364400 103 ntBASIC1.46□□□□□ -2.18
LDLRP01130 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
LDLRP01130 AC093850.1-201ENST00000454121 251 ntBASIC1.46□□□□□ -2.18
LDLRP01130 RNU7-12P-201ENST00000516030 62 ntBASIC1.46□□□□□ -2.18
LDLRP01130 RNU7-25P-201ENST00000516544 62 ntBASIC1.46□□□□□ -2.18
LDLRP01130 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
LDLRP01130 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
LDLRP01130 MIR5197-201ENST00000583721 112 ntBASIC1.46□□□□□ -2.18
LDLRP01130 AC106754.2-201ENST00000623006 233 ntBASIC1.46□□□□□ -2.18
LDLRP01130 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.46□□□□□ -2.18
LDLRP01130 RNU6-1123P-201ENST00000362347 106 ntBASIC1.45□□□□□ -2.18
LDLRP01130 Y_RNA.35-201ENST00000362601 101 ntBASIC1.45□□□□□ -2.18
LDLRP01130 SNORD1A-201ENST00000364968 72 ntBASIC1.45□□□□□ -2.18
LDLRP01130 SNORA22-201ENST00000383907 134 ntBASIC1.45□□□□□ -2.18
LDLRP01130 Y_RNA.547-201ENST00000384654 119 ntBASIC1.45□□□□□ -2.18
LDLRP01130 MIR548O-201ENST00000408583 114 ntBASIC1.45□□□□□ -2.18
LDLRP01130 SNORD45.4-201ENST00000516629 73 ntBASIC1.45□□□□□ -2.18
LDLRP01130 MIR6734-201ENST00000621166 68 ntBASIC1.45□□□□□ -2.18
LDLRP01130 AL513423.1-201ENST00000621695 132 ntBASIC1.45□□□□□ -2.18
LDLRP01130 MTND5P18-201ENST00000445624 1801 ntBASIC1.45□□□□□ -2.18
LDLRP01130 AL442644.1-201ENST00000454390 3105 ntBASIC1.44□□□□□ -2.18
LDLRP01130 Y_RNA.366-201ENST00000365540 102 ntBASIC1.44□□□□□ -2.18
LDLRP01130 MIR548A1-201ENST00000385041 97 ntBASIC1.44□□□□□ -2.18
LDLRP01130 MIR660-201ENST00000385235 97 ntBASIC1.44□□□□□ -2.18
LDLRP01130 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.44□□□□□ -2.18
LDLRP01130 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.44□□□□□ -2.18
LDLRP01130 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.44□□□□□ -2.18
LDLRP01130 SNORD36C-201ENST00000516733 66 ntBASIC1.44□□□□□ -2.18
LDLRP01130 AC015688.6-201ENST00000577737 104 ntBASIC1.44□□□□□ -2.18
LDLRP01130 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
LDLRP01130 AL670379.3-201ENST00000605040 251 ntBASIC1.44□□□□□ -2.18
LDLRP01130 AC025166.1-201ENST00000612411 163 ntBASIC1.44□□□□□ -2.18
LDLRP01130 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LDLRP01130 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
LDLRP01130 Y_RNA.37-201ENST00000362606 108 ntBASIC1.43□□□□□ -2.18
LDLRP01130 SNORD114-22-201ENST00000365423 72 ntBASIC1.43□□□□□ -2.18
LDLRP01130 RNU6-442P-201ENST00000383968 104 ntBASIC1.43□□□□□ -2.18
LDLRP01130 RNU6-163P-201ENST00000384396 106 ntBASIC1.43□□□□□ -2.18
LDLRP01130 SNORD116-21-201ENST00000384507 92 ntBASIC1.43□□□□□ -2.18
LDLRP01130 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
LDLRP01130 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
LDLRP01130 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
LDLRP01130 MTATP6P21-201ENST00000440681 189 ntBASIC1.43□□□□□ -2.18
LDLRP01130 AC079140.2-201ENST00000506193 142 ntBASIC1.43□□□□□ -2.18
LDLRP01130 Y_RNA.714-201ENST00000517065 90 ntBASIC1.43□□□□□ -2.18
LDLRP01130 MIR4422-201ENST00000581938 83 ntBASIC1.43□□□□□ -2.18
LDLRP01130 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
LDLRP01130 AC134878.1-201ENST00000619901 243 ntBASIC1.43□□□□□ -2.18
LDLRP01130 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
LDLRP01130 RNU6-349P-201ENST00000362402 107 ntBASIC1.42□□□□□ -2.18
LDLRP01130 RNU6-1298P-201ENST00000362456 101 ntBASIC1.42□□□□□ -2.18
LDLRP01130 RNU6-1084P-201ENST00000362498 107 ntBASIC1.42□□□□□ -2.18
LDLRP01130 SNORD115-28-201ENST00000363931 81 ntBASIC1.42□□□□□ -2.18
LDLRP01130 SNORD14E-201ENST00000364009 85 ntBASIC1.42□□□□□ -2.18
LDLRP01130 snoU2-30.1-201ENST00000365012 70 ntBASIC1.42□□□□□ -2.18
LDLRP01130 RNU6-147P-201ENST00000383983 107 ntBASIC1.42□□□□□ -2.18
LDLRP01130 Y_RNA.410-201ENST00000383992 113 ntBASIC1.42□□□□□ -2.18
LDLRP01130 MIR548A3-201ENST00000385297 97 ntBASIC1.42□□□□□ -2.18
LDLRP01130 MIR1263-201ENST00000408324 86 ntBASIC1.42□□□□□ -2.18
LDLRP01130 Y_RNA.649-201ENST00000459077 103 ntBASIC1.42□□□□□ -2.18
LDLRP01130 RPS26P48-201ENST00000491713 339 ntBASIC1.42□□□□□ -2.18
LDLRP01130 CYCTP-201ENST00000504253 315 ntBASIC1.42□□□□□ -2.18
LDLRP01130 AC114811.1-201ENST00000507207 168 ntBASIC1.42□□□□□ -2.18
LDLRP01130 SNORA31.4-201ENST00000516049 129 ntBASIC1.42□□□□□ -2.18
LDLRP01130 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
LDLRP01130 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.42□□□□□ -2.18
LDLRP01130 MIR3937-201ENST00000580135 106 ntBASIC1.42□□□□□ -2.18
LDLRP01130 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms