Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR4662B-201ENST00000579498 81 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 AC134878.1-201ENST00000619901 243 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
PDGFBP01127 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 Y_RNA.634-201ENST00000364811 113 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 Y_RNA.292-201ENST00000364904 97 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 Y_RNA.304-201ENST00000365011 112 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 Y_RNA.432-201ENST00000384087 111 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 RNU6-938P-201ENST00000411285 103 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 SNORA18.4-201ENST00000516440 124 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 RNU6-504P-201ENST00000516568 104 ntBASIC0.76□□□□□ -2.29
PDGFBP01127 SNORD45.3-201ENST00000363836 72 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 Y_RNA.352-201ENST00000365439 102 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 MIR548A2-201ENST00000384956 97 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 MIR1302-3-201ENST00000408128 138 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 AC067940.1-201ENST00000458411 300 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 SNORD2.1-201ENST00000458762 69 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 snoU13.21-201ENST00000459368 105 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.75□□□□□ -2.29
PDGFBP01127 RNU6-1045P-201ENST00000516321 107 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 MIR2115-201ENST00000516657 100 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 AC025627.3-201ENST00000582078 182 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 AC243829.3-201ENST00000622177 108 ntBASIC0.75□□□□□ -2.29
PDGFBP01127 AL589743.1-201ENST00000551932 2712 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 SNORD113.3-201ENST00000364630 78 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 Y_RNA.262-201ENST00000364641 102 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 SNORA27-201ENST00000384323 126 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 SNORD83.1-201ENST00000411362 77 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AL392103.1-201ENST00000447000 198 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.74□□□□□ -2.29
PDGFBP01127 MIR3129-201ENST00000581095 76 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AL353765.1-201ENST00000605514 183 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AC104465.1-201ENST00000611365 139 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AL442067.1-201ENST00000613261 223 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AC099654.10-201ENST00000640395 161 ntBASIC0.74□□□□□ -2.29
PDGFBP01127 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.73□□□□□ -2.29
PDGFBP01127 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
PDGFBP01127 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 Y_RNA.133-201ENST00000363428 110 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 SNORA1-201ENST00000384107 130 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 RNU6-125P-201ENST00000384505 107 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 MIR616-201ENST00000385293 97 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 RNU6-913P-201ENST00000390913 95 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.73□□□□□ -2.29
PDGFBP01127 MTCYBP9-201ENST00000431021 303 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 AL121914.1-201ENST00000450188 156 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 AP000753.3-201ENST00000604083 169 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 AL353621.2-201ENST00000605340 133 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 RNU2-4P-201ENST00000606190 192 ntBASIC0.73□□□□□ -2.29
PDGFBP01127 SNORD115-34-201ENST00000362441 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 Y_RNA.23-201ENST00000362496 106 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-12-201ENST00000362583 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-29-201ENST00000362834 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-9-201ENST00000362912 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-21-201ENST00000362963 81 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 RNU6-653P-201ENST00000363074 106 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-14-201ENST00000363090 81 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-13-201ENST00000363358 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-41-201ENST00000363608 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-11-201ENST00000363616 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-5-201ENST00000363633 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-39-201ENST00000363694 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-4-201ENST00000363810 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-16-201ENST00000363887 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-6-201ENST00000363942 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-42-201ENST00000364273 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-15-201ENST00000364809 81 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-1-201ENST00000364961 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-26-201ENST00000365067 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-10-201ENST00000365073 81 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-43-201ENST00000365503 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 RNU4-17P-201ENST00000365598 141 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-36-201ENST00000365629 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 RNU6-484P-201ENST00000384016 107 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORA40.5-201ENST00000391061 128 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD111-201ENST00000408139 94 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SEPT7P4-201ENST00000437076 306 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 U7.7-201ENST00000459276 60 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 RNU7-45P-201ENST00000459460 63 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 RNU11-2P-201ENST00000516898 142 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 MIR3128-201ENST00000581957 66 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 MIR4282-201ENST00000583613 67 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 SNORD115-40-201ENST00000606510 82 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 AL136317.1-201ENST00000612653 226 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
PDGFBP01127 RNU6-888P-201ENST00000363010 101 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 RNA5SP499-201ENST00000363982 119 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 RNU6-381P-201ENST00000391259 108 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 SNORA26-201ENST00000391286 122 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 SNORA79-201ENST00000408376 140 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 MIR548H3-201ENST00000408771 118 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 RNU6-1190P-201ENST00000410811 104 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms