Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SNORA40.5-201ENST00000391061 128 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 SNORA75.5-201ENST00000391291 81 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 RNU7-67P-201ENST00000459003 62 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 RNU2-13P-201ENST00000515909 113 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 SNORA31.2-201ENST00000516019 134 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
CLPTM1O96005 RNA5SP48-201ENST00000363969 126 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 RNU6-151P-201ENST00000364158 107 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 RNU6-449P-201ENST00000383914 107 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 Y_RNA.537-201ENST00000384626 109 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 AC107297.1-201ENST00000459991 176 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 RPS29P24-201ENST00000486345 171 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 TRMT112P2-201ENST00000512910 132 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 RNU7-40P-201ENST00000516397 64 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 RNU6-1149P-201ENST00000516810 97 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 RNU6-958P-201ENST00000516995 106 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 MTND1P7-201ENST00000632801 297 ntBASIC1.1□□□□□ -2.23
CLPTM1O96005 Y_RNA.52-201ENST00000362760 96 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 RNY1P10-201ENST00000363268 113 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 RNU6-255P-201ENST00000516957 105 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 MIR548AO-201ENST00000579992 96 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 AL359821.1-201ENST00000605519 182 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
CLPTM1O96005 MTND5P32-201ENST00000560711 1802 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLPTM1O96005 Y_RNA.170-201ENST00000363746 110 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 SNORA25.9-201ENST00000365087 128 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 Y_RNA.351-201ENST00000365436 96 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 SNORA24-201ENST00000384096 131 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 Y_RNA.580-201ENST00000391004 95 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 RNU2-11P-201ENST00000459191 187 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 RNU6-998P-201ENST00000515894 101 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 SCARNA15-202ENST00000516881 127 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 Y_RNA.778-201ENST00000620203 90 ntBASIC1.08□□□□□ -2.24
CLPTM1O96005 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLPTM1O96005 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CLPTM1O96005 Y_RNA.327-201ENST00000365201 102 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 Y_RNA.363-201ENST00000365529 113 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 Y_RNA.497-201ENST00000384447 98 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 RNU6-1067P-201ENST00000384752 107 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 RNU6-913P-201ENST00000390913 95 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 MIR1185-1-201ENST00000408598 86 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 RNU6-1190P-201ENST00000410811 104 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 AL035398.1-201ENST00000430869 322 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 HMGN1P33-201ENST00000432945 451 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 RNU7-96P-201ENST00000459535 64 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 AC112693.2-201ENST00000556538 232 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 MIR3646-201ENST00000578301 84 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 AC091932.4-201ENST00000623386 200 ntBASIC1.07□□□□□ -2.24
CLPTM1O96005 AL596211.1-201ENST00000569873 2277 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLPTM1O96005 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.06□□□□□ -2.24
CLPTM1O96005 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 Y_RNA.464-201ENST00000384282 110 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 RNU6-910P-201ENST00000390844 107 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 MIR1302-7-201ENST00000408841 72 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 RNU6-321P-201ENST00000410912 106 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 RNU7-45P-201ENST00000459460 63 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 SNORA25.12-201ENST00000516202 82 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.06□□□□□ -2.24
CLPTM1O96005 AC131055.1-201ENST00000584626 316 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
CLPTM1O96005 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
CLPTM1O96005 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 RNU6-460P-201ENST00000391158 108 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 AC090844.1-201ENST00000422019 156 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 SNORA31.4-201ENST00000516049 129 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 RNU7-53P-201ENST00000516705 60 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 RNU2-60P-201ENST00000517290 128 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 MIR7111-201ENST00000619751 72 ntBASIC1.05□□□□□ -2.24
CLPTM1O96005 MIR302B-201ENST00000362188 73 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 RNU4-16P-201ENST00000364737 141 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 Y_RNA.584-201ENST00000391090 114 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 RNU7-73P-201ENST00000458743 63 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 snoU13.16-201ENST00000459350 104 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 RNA5SP272-201ENST00000516095 111 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 RNU7-70P-201ENST00000516941 66 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 RNU6-1212P-201ENST00000517023 104 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.04□□□□□ -2.24
CLPTM1O96005 AP003716.2-201ENST00000528260 108 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
CLPTM1O96005 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.04□□□□□ -2.24
CLPTM1O96005 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLPTM1O96005 RNU6-508P-201ENST00000363231 103 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms