Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 Y_RNA.115-201ENST00000363272 98 ntBASIC0.18□□□□□ -2.38
MBD3O95983 RNA5SP457-201ENST00000363657 124 ntBASIC0.18□□□□□ -2.38
MBD3O95983 RNY3P5-201ENST00000384127 102 ntBASIC0.18□□□□□ -2.38
MBD3O95983 RNU6-514P-201ENST00000384208 107 ntBASIC0.18□□□□□ -2.38
MBD3O95983 RNU6-679P-201ENST00000391003 106 ntBASIC0.18□□□□□ -2.38
MBD3O95983 RNU6-101P-201ENST00000410323 104 ntBASIC0.18□□□□□ -2.38
MBD3O95983 AL731563.1-201ENST00000442202 214 ntBASIC0.18□□□□□ -2.38
MBD3O95983 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
MBD3O95983 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.18□□□□□ -2.38
MBD3O95983 RNU6-448P-201ENST00000517052 107 ntBASIC0.18□□□□□ -2.38
MBD3O95983 AC131281.1-201ENST00000522984 164 ntBASIC0.18□□□□□ -2.38
MBD3O95983 Y_RNA.66-201ENST00000362862 102 ntBASIC0.17□□□□□ -2.38
MBD3O95983 RNU6-1099P-201ENST00000363533 107 ntBASIC0.17□□□□□ -2.38
MBD3O95983 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
MBD3O95983 RNA5SP117-201ENST00000365294 118 ntBASIC0.17□□□□□ -2.38
MBD3O95983 MIR548I3-201ENST00000408378 149 ntBASIC0.17□□□□□ -2.38
MBD3O95983 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
MBD3O95983 RNA5SP261-201ENST00000410536 106 ntBASIC0.17□□□□□ -2.38
MBD3O95983 RNU6-1143P-201ENST00000516125 104 ntBASIC0.17□□□□□ -2.38
MBD3O95983 RNA5SP153-201ENST00000516498 76 ntBASIC0.17□□□□□ -2.38
MBD3O95983 SNORD36C-201ENST00000516733 66 ntBASIC0.17□□□□□ -2.38
MBD3O95983 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.17□□□□□ -2.38
MBD3O95983 RNA5SP325-201ENST00000363756 130 ntBASIC0.16□□□□□ -2.38
MBD3O95983 SNORA8.3-201ENST00000384679 139 ntBASIC0.16□□□□□ -2.38
MBD3O95983 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
MBD3O95983 RNU6-121P-201ENST00000410525 99 ntBASIC0.16□□□□□ -2.38
MBD3O95983 HMGN1P33-201ENST00000432945 451 ntBASIC0.16□□□□□ -2.38
MBD3O95983 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
MBD3O95983 MIR3678-201ENST00000578455 94 ntBASIC0.16□□□□□ -2.38
MBD3O95983 AC097639.2-201ENST00000603159 172 ntBASIC0.16□□□□□ -2.38
MBD3O95983 snoU18.1-201ENST00000629629 71 ntBASIC0.16□□□□□ -2.38
MBD3O95983 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
MBD3O95983 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
MBD3O95983 Y_RNA.28-201ENST00000362554 111 ntBASIC0.15□□□□□ -2.39
MBD3O95983 snoU2_19.2-201ENST00000363024 80 ntBASIC0.15□□□□□ -2.39
MBD3O95983 RNU6-770P-201ENST00000363929 105 ntBASIC0.15□□□□□ -2.39
MBD3O95983 RNU6-1189P-201ENST00000383958 107 ntBASIC0.15□□□□□ -2.39
MBD3O95983 Y_RNA.440-201ENST00000384120 114 ntBASIC0.15□□□□□ -2.39
MBD3O95983 RNU2-70P-201ENST00000410718 179 ntBASIC0.15□□□□□ -2.39
MBD3O95983 AL358176.2-201ENST00000425769 204 ntBASIC0.15□□□□□ -2.39
MBD3O95983 AF228730.3-201ENST00000436691 102 ntBASIC0.15□□□□□ -2.39
MBD3O95983 RNU2-11P-201ENST00000459191 187 ntBASIC0.15□□□□□ -2.39
MBD3O95983 RNU6-1299P-201ENST00000516316 100 ntBASIC0.15□□□□□ -2.39
MBD3O95983 SNORA40.15-201ENST00000516884 107 ntBASIC0.15□□□□□ -2.39
MBD3O95983 MIR4801-201ENST00000582704 82 ntBASIC0.15□□□□□ -2.39
MBD3O95983 AC006006.1-201ENST00000603082 144 ntBASIC0.15□□□□□ -2.39
MBD3O95983 AL008718.3-201ENST00000610217 321 ntBASIC0.15□□□□□ -2.39
MBD3O95983 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.15□□□□□ -2.39
MBD3O95983 RNU6-1309P-201ENST00000363305 108 ntBASIC0.14□□□□□ -2.39
MBD3O95983 SNORA8.2-201ENST00000384372 139 ntBASIC0.14□□□□□ -2.39
MBD3O95983 Y_RNA.541-201ENST00000384640 113 ntBASIC0.14□□□□□ -2.39
MBD3O95983 MIR626-201ENST00000385032 94 ntBASIC0.14□□□□□ -2.39
MBD3O95983 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
MBD3O95983 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
MBD3O95983 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.14□□□□□ -2.39
MBD3O95983 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.14□□□□□ -2.39
MBD3O95983 Y_RNA.105-201ENST00000363182 111 ntBASIC0.13□□□□□ -2.39
MBD3O95983 RNA5SP62-201ENST00000363457 110 ntBASIC0.13□□□□□ -2.39
MBD3O95983 Y_RNA.389-201ENST00000383924 113 ntBASIC0.13□□□□□ -2.39
MBD3O95983 Y_RNA.394-201ENST00000383942 103 ntBASIC0.13□□□□□ -2.39
MBD3O95983 Y_RNA.430-201ENST00000384081 110 ntBASIC0.13□□□□□ -2.39
MBD3O95983 RNU6-662P-201ENST00000384253 104 ntBASIC0.13□□□□□ -2.39
MBD3O95983 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
MBD3O95983 SNORD12C-201ENST00000386307 89 ntBASIC0.13□□□□□ -2.39
MBD3O95983 AC022028.1-201ENST00000412054 408 ntBASIC0.13□□□□□ -2.39
MBD3O95983 AL109933.3-201ENST00000619095 188 ntBASIC0.13□□□□□ -2.39
MBD3O95983 MIR6717-201ENST00000622747 73 ntBASIC0.13□□□□□ -2.39
MBD3O95983 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.13□□□□□ -2.39
MBD3O95983 MIR369-201ENST00000362155 70 ntBASIC0.12□□□□□ -2.39
MBD3O95983 Y_RNA.31-201ENST00000362574 102 ntBASIC0.12□□□□□ -2.39
MBD3O95983 Y_RNA.214-201ENST00000364201 112 ntBASIC0.12□□□□□ -2.39
MBD3O95983 Y_RNA.229-201ENST00000364347 113 ntBASIC0.12□□□□□ -2.39
MBD3O95983 RNU6-484P-201ENST00000384016 107 ntBASIC0.12□□□□□ -2.39
MBD3O95983 RNY3P14-201ENST00000384309 102 ntBASIC0.12□□□□□ -2.39
MBD3O95983 SNORA26.6-201ENST00000391256 115 ntBASIC0.12□□□□□ -2.39
MBD3O95983 RNU6-1270P-201ENST00000517128 108 ntBASIC0.12□□□□□ -2.39
MBD3O95983 RNU6-988P-201ENST00000519081 107 ntBASIC0.12□□□□□ -2.39
MBD3O95983 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.12□□□□□ -2.39
MBD3O95983 RNU6-653P-201ENST00000363074 106 ntBASIC0.11□□□□□ -2.39
MBD3O95983 Y_RNA.634-201ENST00000364811 113 ntBASIC0.11□□□□□ -2.39
MBD3O95983 MIR1197-201ENST00000408818 88 ntBASIC0.11□□□□□ -2.39
MBD3O95983 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
MBD3O95983 Y_RNA.42-201ENST00000362660 108 ntBASIC0.1□□□□□ -2.39
MBD3O95983 Y_RNA.258-201ENST00000364613 105 ntBASIC0.1□□□□□ -2.39
MBD3O95983 RNU2-59P-201ENST00000410482 191 ntBASIC0.1□□□□□ -2.39
MBD3O95983 ELOCP20-201ENST00000422460 345 ntBASIC0.1□□□□□ -2.39
MBD3O95983 RNU7-80P-201ENST00000459562 61 ntBASIC0.1□□□□□ -2.39
MBD3O95983 RNU6-135P-201ENST00000516769 101 ntBASIC0.1□□□□□ -2.39
MBD3O95983 SNORA25.18-201ENST00000607153 114 ntBASIC0.1□□□□□ -2.39
MBD3O95983 MIR8066-201ENST00000617280 78 ntBASIC0.1□□□□□ -2.39
MBD3O95983 Y_RNA.24-201ENST00000362508 103 ntBASIC0.09□□□□□ -2.4
MBD3O95983 Y_RNA.152-201ENST00000363578 100 ntBASIC0.09□□□□□ -2.4
MBD3O95983 Y_RNA.251-201ENST00000364551 99 ntBASIC0.09□□□□□ -2.4
MBD3O95983 RNU6-450P-201ENST00000364654 107 ntBASIC0.09□□□□□ -2.4
MBD3O95983 RNU6-740P-201ENST00000364734 105 ntBASIC0.09□□□□□ -2.4
MBD3O95983 RNU6-211P-201ENST00000384047 107 ntBASIC0.09□□□□□ -2.4
MBD3O95983 Y_RNA.432-201ENST00000384087 111 ntBASIC0.09□□□□□ -2.4
MBD3O95983 RNU6-1190P-201ENST00000410811 104 ntBASIC0.09□□□□□ -2.4
MBD3O95983 SERF1AP1-201ENST00000514575 187 ntBASIC0.09□□□□□ -2.4
MBD3O95983 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms