Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MIR5688-201ENST00000580619 83 ntBASIC0.61□□□□□ -2.31
SIX3O95343 AP000942.4-201ENST00000604811 241 ntBASIC0.61□□□□□ -2.31
SIX3O95343 Y_RNA.7-201ENST00000362352 102 ntBASIC0.6□□□□□ -2.31
SIX3O95343 Y_RNA.37-201ENST00000362606 108 ntBASIC0.6□□□□□ -2.31
SIX3O95343 Y_RNA.84-201ENST00000363011 104 ntBASIC0.6□□□□□ -2.31
SIX3O95343 RNU6-211P-201ENST00000384047 107 ntBASIC0.6□□□□□ -2.31
SIX3O95343 RNU6-639P-201ENST00000384074 107 ntBASIC0.6□□□□□ -2.31
SIX3O95343 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.6□□□□□ -2.31
SIX3O95343 MIR1468-201ENST00000410600 86 ntBASIC0.6□□□□□ -2.31
SIX3O95343 AC244098.3-201ENST00000424803 96 ntBASIC0.6□□□□□ -2.31
SIX3O95343 MTND5P22-201ENST00000458380 195 ntBASIC0.6□□□□□ -2.31
SIX3O95343 RNU6-1299P-201ENST00000516316 100 ntBASIC0.6□□□□□ -2.31
SIX3O95343 RNU6-1338P-201ENST00000516328 91 ntBASIC0.6□□□□□ -2.31
SIX3O95343 RNA5SP67-201ENST00000516422 131 ntBASIC0.6□□□□□ -2.31
SIX3O95343 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.6□□□□□ -2.31
SIX3O95343 AC044792.1-201ENST00000593294 196 ntBASIC0.6□□□□□ -2.31
SIX3O95343 MIR342-201ENST00000362212 99 ntBASIC0.59□□□□□ -2.31
SIX3O95343 SNORD45.3-201ENST00000363836 72 ntBASIC0.59□□□□□ -2.31
SIX3O95343 SNORA1.1-201ENST00000364671 133 ntBASIC0.59□□□□□ -2.31
SIX3O95343 Y_RNA.494-201ENST00000384432 111 ntBASIC0.59□□□□□ -2.31
SIX3O95343 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
SIX3O95343 snoU13.21-201ENST00000459368 105 ntBASIC0.59□□□□□ -2.31
SIX3O95343 RPS29P24-201ENST00000486345 171 ntBASIC0.59□□□□□ -2.31
SIX3O95343 RNU6-758P-201ENST00000516292 89 ntBASIC0.59□□□□□ -2.31
SIX3O95343 SNORA18.4-201ENST00000516440 124 ntBASIC0.59□□□□□ -2.31
SIX3O95343 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
SIX3O95343 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.59□□□□□ -2.31
SIX3O95343 AC023932.2-201ENST00000603176 175 ntBASIC0.59□□□□□ -2.31
SIX3O95343 Y_RNA.229-201ENST00000364347 113 ntBASIC0.58□□□□□ -2.32
SIX3O95343 SNORD24-201ENST00000383884 75 ntBASIC0.58□□□□□ -2.32
SIX3O95343 Y_RNA.457-201ENST00000384237 111 ntBASIC0.58□□□□□ -2.32
SIX3O95343 Y_RNA.572-201ENST00000384757 98 ntBASIC0.58□□□□□ -2.32
SIX3O95343 AC015818.7-201ENST00000428754 109 ntBASIC0.58□□□□□ -2.32
SIX3O95343 AC087499.7-201ENST00000441958 109 ntBASIC0.58□□□□□ -2.32
SIX3O95343 AL138752.1-201ENST00000452964 351 ntBASIC0.58□□□□□ -2.32
SIX3O95343 Y_RNA.679-201ENST00000516416 91 ntBASIC0.58□□□□□ -2.32
SIX3O95343 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
SIX3O95343 AC020661.2-201ENST00000560114 134 ntBASIC0.58□□□□□ -2.32
SIX3O95343 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.58□□□□□ -2.32
SIX3O95343 UBE2WP1-201ENST00000362030 340 ntBASIC0.57□□□□□ -2.32
SIX3O95343 MIR302B-201ENST00000362188 73 ntBASIC0.57□□□□□ -2.32
SIX3O95343 Y_RNA.44-201ENST00000362676 108 ntBASIC0.57□□□□□ -2.32
SIX3O95343 RNU6-1309P-201ENST00000363305 108 ntBASIC0.57□□□□□ -2.32
SIX3O95343 Y_RNA.199-201ENST00000364014 102 ntBASIC0.57□□□□□ -2.32
SIX3O95343 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
SIX3O95343 SNORD61-201ENST00000384252 73 ntBASIC0.57□□□□□ -2.32
SIX3O95343 MIR518F-201ENST00000384973 87 ntBASIC0.57□□□□□ -2.32
SIX3O95343 SNRPGP12-201ENST00000449481 213 ntBASIC0.57□□□□□ -2.32
SIX3O95343 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.57□□□□□ -2.32
SIX3O95343 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.57□□□□□ -2.32
SIX3O95343 AC007751.1-201ENST00000529260 376 ntBASIC0.57□□□□□ -2.32
SIX3O95343 MIR4514-201ENST00000581410 57 ntBASIC0.57□□□□□ -2.32
SIX3O95343 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.57□□□□□ -2.32
SIX3O95343 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
SIX3O95343 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.57□□□□□ -2.32
SIX3O95343 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
SIX3O95343 Y_RNA.117-201ENST00000363294 101 ntBASIC0.56□□□□□ -2.32
SIX3O95343 Y_RNA.153-201ENST00000363615 91 ntBASIC0.56□□□□□ -2.32
SIX3O95343 RNA5SP368-201ENST00000364298 116 ntBASIC0.56□□□□□ -2.32
SIX3O95343 RNU6-580P-201ENST00000365159 107 ntBASIC0.56□□□□□ -2.32
SIX3O95343 SNORA24-201ENST00000384096 131 ntBASIC0.56□□□□□ -2.32
SIX3O95343 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
SIX3O95343 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.56□□□□□ -2.32
SIX3O95343 Y_RNA.622-201ENST00000411091 108 ntBASIC0.56□□□□□ -2.32
SIX3O95343 AC090844.1-201ENST00000422019 156 ntBASIC0.56□□□□□ -2.32
SIX3O95343 RNU7-73P-201ENST00000458743 63 ntBASIC0.56□□□□□ -2.32
SIX3O95343 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.56□□□□□ -2.32
SIX3O95343 SNORD36C-201ENST00000516733 66 ntBASIC0.56□□□□□ -2.32
SIX3O95343 U6.104-201ENST00000637979 90 ntBASIC0.56□□□□□ -2.32
SIX3O95343 Y_RNA.275-201ENST00000364726 110 ntBASIC0.55□□□□□ -2.32
SIX3O95343 Y_RNA.432-201ENST00000384087 111 ntBASIC0.55□□□□□ -2.32
SIX3O95343 RNU6-364P-201ENST00000384387 107 ntBASIC0.55□□□□□ -2.32
SIX3O95343 MIR573-201ENST00000384964 99 ntBASIC0.55□□□□□ -2.32
SIX3O95343 RNU6-985P-201ENST00000410182 104 ntBASIC0.55□□□□□ -2.32
SIX3O95343 RNU6-1203P-201ENST00000410703 110 ntBASIC0.55□□□□□ -2.32
SIX3O95343 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
SIX3O95343 RPL39P25-201ENST00000449384 154 ntBASIC0.55□□□□□ -2.32
SIX3O95343 MIR4676-201ENST00000583078 72 ntBASIC0.55□□□□□ -2.32
SIX3O95343 AL162730.1-201ENST00000605734 292 ntBASIC0.55□□□□□ -2.32
SIX3O95343 AC010332.2-201ENST00000613083 1904 ntBASIC0.55□□□□□ -2.32
SIX3O95343 RNA5SP98-201ENST00000363158 137 ntBASIC0.54□□□□□ -2.32
SIX3O95343 SNORA33.2-201ENST00000365413 134 ntBASIC0.54□□□□□ -2.32
SIX3O95343 MIR626-201ENST00000385032 94 ntBASIC0.54□□□□□ -2.32
SIX3O95343 RNU6-913P-201ENST00000390913 95 ntBASIC0.54□□□□□ -2.32
SIX3O95343 Y_RNA.590-201ENST00000410140 107 ntBASIC0.54□□□□□ -2.32
SIX3O95343 AL022718.1-201ENST00000412004 84 ntBASIC0.54□□□□□ -2.32
SIX3O95343 RNU2-11P-201ENST00000459191 187 ntBASIC0.54□□□□□ -2.32
SIX3O95343 MTRNR2L2-201ENST00000604882 87 ntBASIC0.54□□□□□ -2.32
SIX3O95343 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
SIX3O95343 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SIX3O95343 RNU6-888P-201ENST00000363010 101 ntBASIC0.53□□□□□ -2.32
SIX3O95343 RNU6-1189P-201ENST00000383958 107 ntBASIC0.53□□□□□ -2.32
SIX3O95343 RNU6-1237P-201ENST00000384777 107 ntBASIC0.53□□□□□ -2.32
SIX3O95343 MIR588-201ENST00000384900 83 ntBASIC0.53□□□□□ -2.32
SIX3O95343 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
SIX3O95343 SNORD77.3-201ENST00000391113 65 ntBASIC0.53□□□□□ -2.32
SIX3O95343 MIR938-201ENST00000401216 83 ntBASIC0.53□□□□□ -2.32
SIX3O95343 SNORA79-201ENST00000408376 140 ntBASIC0.53□□□□□ -2.32
SIX3O95343 Y_RNA.604-201ENST00000410574 102 ntBASIC0.53□□□□□ -2.32
SIX3O95343 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms