Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC011753.1-201ENST00000451001 220 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 RNU7-34P-201ENST00000459394 64 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 UBL5P1-201ENST00000507979 193 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 AC005786.1-201ENST00000588553 154 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 AC005000.2-201ENST00000605468 310 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 SNORA28-201ENST00000606769 126 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 SNORA32-201ENST00000384072 121 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 SNORA70.7-201ENST00000384159 133 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 MIR128-1-201ENST00000384921 82 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 SNORA11.4-201ENST00000408823 129 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 Y_RNA.609-201ENST00000410669 89 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 RNU7-53P-201ENST00000516705 60 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 MIR5007-201ENST00000583098 95 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 MIR4712-201ENST00000583750 82 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 RNU6-86P-201ENST00000606534 107 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM13O60858 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 SEPT14P17-201ENST00000617978 177 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
TRIM13O60858 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM13O60858 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
TRIM13O60858 SNORA1.2-201ENST00000365189 134 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 SNORA24-201ENST00000384096 131 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 MIR196B-201ENST00000384852 84 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 SNORA48.2-201ENST00000390926 124 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 RNA5SP261-201ENST00000410536 106 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 RNU6-1190P-201ENST00000410811 104 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 AL445685.2-201ENST00000422551 342 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 SNORA31.10-201ENST00000516482 106 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 DNAJC19P9-201ENST00000555084 351 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 AC006023.1-201ENST00000603944 259 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 MIR6717-201ENST00000622747 73 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 AC022513.1-201ENST00000624512 117 ntBASIC2.25□□□□□ -2.05
TRIM13O60858 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM13O60858 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM13O60858 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TRIM13O60858 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM13O60858 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM13O60858 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM13O60858 RNU6-833P-201ENST00000363486 107 ntBASIC2.24□□□□□ -2.05
TRIM13O60858 SNORD38.1-201ENST00000363863 68 ntBASIC2.24□□□□□ -2.05
TRIM13O60858 SNORD115-27-201ENST00000364430 82 ntBASIC2.24□□□□□ -2.05
TRIM13O60858 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM13O60858 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.24□□□□□ -2.05
TRIM13O60858 RNU7-2P-201ENST00000516096 62 ntBASIC2.24□□□□□ -2.05
TRIM13O60858 MIR3200-201ENST00000580767 85 ntBASIC2.24□□□□□ -2.05
TRIM13O60858 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM13O60858 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM13O60858 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM13O60858 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM13O60858 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM13O60858 AC062016.1-201ENST00000355719 319 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RNU6-1244P-201ENST00000363614 108 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RNA5SP68-201ENST00000363885 119 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 Y_RNA.370-201ENST00000365589 108 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RNU6-1307P-201ENST00000391012 103 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 SNORA11.1-201ENST00000408133 129 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 BX510359.4-201ENST00000423750 193 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RPS29P29-201ENST00000456396 171 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RNA5SP148-201ENST00000516527 94 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 RNU6-958P-201ENST00000516995 106 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 MIR4319-201ENST00000577285 85 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 AL033523.1-201ENST00000605153 153 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 MIR6817-201ENST00000615588 66 ntBASIC2.23□□□□□ -2.05
TRIM13O60858 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM13O60858 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TRIM13O60858 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TRIM13O60858 RNU6-1229P-201ENST00000364295 107 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 RNU6-524P-201ENST00000384270 107 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 RNA5SP465-201ENST00000391195 109 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 U8.16-201ENST00000391279 133 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 RNA5SP184-201ENST00000411071 108 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 AL161932.1-201ENST00000437408 146 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 RNU7-73P-201ENST00000458743 63 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 RNU7-67P-201ENST00000459003 62 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 AC234781.5-201ENST00000508429 271 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 AL020996.3-201ENST00000606617 222 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 MIR4791-201ENST00000607666 84 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 AL365361.1-201ENST00000566942 3481 ntBASIC2.22□□□□□ -2.05
TRIM13O60858 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM13O60858 MIR34C-201ENST00000384831 77 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 MIR206-201ENST00000384872 86 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 MIR518A2-201ENST00000384966 87 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 RNU6-913P-201ENST00000390913 95 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 RNU11-3P-201ENST00000391111 133 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 RNA5SP270-201ENST00000411361 118 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 HSPE1P9-201ENST00000440046 311 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.21□□□□□ -2.06
TRIM13O60858 AC069114.2-201ENST00000604699 304 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 AC245884.12-201ENST00000615364 59 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 ZNF658B-202ENST00000615961 3375 ntBASIC2.21□□□□□ -2.06
TRIM13O60858 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM13O60858 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
TRIM13O60858 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM13O60858 RNU6-457P-201ENST00000363999 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms