Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SNORA25-201ENST00000384384 134 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 MIR624-201ENST00000385217 97 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 AL035398.1-201ENST00000430869 322 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 snoU13.16-201ENST00000459350 104 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 RNU7-96P-201ENST00000459535 64 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 RNU11-2P-201ENST00000516898 142 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 MIR5197-201ENST00000583721 112 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 AL022345.2-201ENST00000606307 135 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CTNND1O60716 MIR103A2-201ENST00000362154 78 ntBASIC1.46□□□□□ -2.18
CTNND1O60716 SNORA80D-201ENST00000384488 135 ntBASIC1.46□□□□□ -2.18
CTNND1O60716 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.46□□□□□ -2.18
CTNND1O60716 RNU7-121P-201ENST00000516604 62 ntBASIC1.46□□□□□ -2.18
CTNND1O60716 RNU7-53P-201ENST00000516705 60 ntBASIC1.46□□□□□ -2.18
CTNND1O60716 MIR376A2-201ENST00000636782 80 ntBASIC1.46□□□□□ -2.18
CTNND1O60716 RNU1-93P-201ENST00000364704 169 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 Y_RNA.351-201ENST00000365436 96 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 RNU6-768P-201ENST00000384683 107 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 MIR1185-1-201ENST00000408598 86 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 RNU5E-9P-201ENST00000411164 104 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 RNU7-73P-201ENST00000458743 63 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 RNU7-80P-201ENST00000459562 61 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 SNORD79.1-201ENST00000516069 84 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.45□□□□□ -2.18
CTNND1O60716 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 MIR548AO-201ENST00000579992 96 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 FTX_2.1-201ENST00000618816 94 ntBASIC1.45□□□□□ -2.18
CTNND1O60716 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
CTNND1O60716 SNORD12-201ENST00000391002 90 ntBASIC1.44□□□□□ -2.18
CTNND1O60716 MIR1302-7-201ENST00000408841 72 ntBASIC1.44□□□□□ -2.18
CTNND1O60716 RNU6-1135P-201ENST00000411083 103 ntBASIC1.44□□□□□ -2.18
CTNND1O60716 AL392103.1-201ENST00000447000 198 ntBASIC1.44□□□□□ -2.18
CTNND1O60716 RNU6-998P-201ENST00000515894 101 ntBASIC1.44□□□□□ -2.18
CTNND1O60716 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.44□□□□□ -2.18
CTNND1O60716 MIR6844-201ENST00000637122 62 ntBASIC1.44□□□□□ -2.18
CTNND1O60716 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CTNND1O60716 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
CTNND1O60716 Y_RNA.270-201ENST00000364693 104 ntBASIC1.43□□□□□ -2.18
CTNND1O60716 MIR222-201ENST00000384992 110 ntBASIC1.43□□□□□ -2.18
CTNND1O60716 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CTNND1O60716 AC074198.2-201ENST00000508153 258 ntBASIC1.43□□□□□ -2.18
CTNND1O60716 MIR3646-201ENST00000578301 84 ntBASIC1.43□□□□□ -2.18
CTNND1O60716 MIR3668-201ENST00000582138 75 ntBASIC1.43□□□□□ -2.18
CTNND1O60716 AC098479.1-201ENST00000609225 154 ntBASIC1.43□□□□□ -2.18
CTNND1O60716 MIR342-201ENST00000362212 99 ntBASIC1.42□□□□□ -2.18
CTNND1O60716 Y_RNA.454-201ENST00000384224 113 ntBASIC1.42□□□□□ -2.18
CTNND1O60716 RNU2-11P-201ENST00000459191 187 ntBASIC1.42□□□□□ -2.18
CTNND1O60716 RNU7-21P-201ENST00000459430 62 ntBASIC1.42□□□□□ -2.18
CTNND1O60716 SEPT14P17-201ENST00000617978 177 ntBASIC1.42□□□□□ -2.18
CTNND1O60716 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CTNND1O60716 Y_RNA.272-201ENST00000364696 102 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 RNU6-396P-201ENST00000365369 105 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 RNU6-42P-201ENST00000384165 107 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 SNORA75.2-201ENST00000391138 150 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 SNORA75.3-201ENST00000391231 150 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 SNORA75.5-201ENST00000391291 81 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 RNA5SP220-201ENST00000516298 104 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 DNAJC19P2-201ENST00000593340 302 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 MIR8055-201ENST00000610739 97 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 RMST_2.1-201ENST00000617263 136 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 AC027335.2-201ENST00000624030 375 ntBASIC1.41□□□□□ -2.18
CTNND1O60716 MIR302B-201ENST00000362188 73 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 RNU6-1082P-201ENST00000364574 107 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 RNU6-1336P-201ENST00000383886 109 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 RNU6-886P-201ENST00000384319 105 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 RNU6-913P-201ENST00000390913 95 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 RNU7-90P-201ENST00000459216 62 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.4□□□□□ -2.19
CTNND1O60716 RNU7-70P-201ENST00000516941 66 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 AL078603.1-201ENST00000603824 313 ntBASIC1.4□□□□□ -2.19
CTNND1O60716 Y_RNA.150-201ENST00000363562 102 ntBASIC1.39□□□□□ -2.19
CTNND1O60716 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
CTNND1O60716 MT-TR-201ENST00000387439 65 ntBASIC1.39□□□□□ -2.19
CTNND1O60716 AC002429.1-201ENST00000437672 148 ntBASIC1.39□□□□□ -2.19
CTNND1O60716 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.39□□□□□ -2.19
CTNND1O60716 MIR2115-201ENST00000516657 100 ntBASIC1.39□□□□□ -2.19
CTNND1O60716 SCARNA15-202ENST00000516881 127 ntBASIC1.39□□□□□ -2.19
CTNND1O60716 MIR6516-201ENST00000630554 81 ntBASIC1.39□□□□□ -2.19
CTNND1O60716 SNORD114-27-201ENST00000363766 70 ntBASIC1.38□□□□□ -2.19
CTNND1O60716 RNU6-818P-201ENST00000364837 108 ntBASIC1.38□□□□□ -2.19
CTNND1O60716 Y_RNA.330-201ENST00000365230 109 ntBASIC1.38□□□□□ -2.19
CTNND1O60716 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
CTNND1O60716 SNORD37.2-201ENST00000391075 66 ntBASIC1.38□□□□□ -2.19
CTNND1O60716 RNU6-394P-201ENST00000410735 107 ntBASIC1.38□□□□□ -2.19
CTNND1O60716 RNU6-1149P-201ENST00000516810 97 ntBASIC1.38□□□□□ -2.19
CTNND1O60716 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.38□□□□□ -2.19
CTNND1O60716 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
CTNND1O60716 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
CTNND1O60716 PCNPP3-201ENST00000393579 471 ntBASIC1.37□□□□□ -2.19
CTNND1O60716 MIR548I3-201ENST00000408378 149 ntBASIC1.37□□□□□ -2.19
CTNND1O60716 RNU6-588P-201ENST00000410281 105 ntBASIC1.37□□□□□ -2.19
CTNND1O60716 MRPL35P3-201ENST00000421557 364 ntBASIC1.37□□□□□ -2.19
CTNND1O60716 AC063976.4-201ENST00000421971 163 ntBASIC1.37□□□□□ -2.19
CTNND1O60716 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms