Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Y_RNA.193-201ENST00000363979 102 ntBASIC0.76□□□□□ -2.29
SNX3O60493 Y_RNA.238-201ENST00000364441 102 ntBASIC0.76□□□□□ -2.29
SNX3O60493 Y_RNA.447-201ENST00000384184 113 ntBASIC0.76□□□□□ -2.29
SNX3O60493 SNORD38B-201ENST00000384690 67 ntBASIC0.76□□□□□ -2.29
SNX3O60493 MIR1827-201ENST00000408549 66 ntBASIC0.76□□□□□ -2.29
SNX3O60493 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.76□□□□□ -2.29
SNX3O60493 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.76□□□□□ -2.29
SNX3O60493 RNU6-1023P-201ENST00000516137 106 ntBASIC0.76□□□□□ -2.29
SNX3O60493 SNORD38B-202ENST00000625943 69 ntBASIC0.76□□□□□ -2.29
SNX3O60493 Y_RNA.307-201ENST00000365022 117 ntBASIC0.75□□□□□ -2.29
SNX3O60493 Y_RNA.452-201ENST00000384202 108 ntBASIC0.75□□□□□ -2.29
SNX3O60493 Y_RNA.542-201ENST00000384641 111 ntBASIC0.75□□□□□ -2.29
SNX3O60493 MIR548I3-201ENST00000408378 149 ntBASIC0.75□□□□□ -2.29
SNX3O60493 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
SNX3O60493 RNU2-64P-201ENST00000411315 191 ntBASIC0.75□□□□□ -2.29
SNX3O60493 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
SNX3O60493 Y_RNA.797-201ENST00000515977 94 ntBASIC0.75□□□□□ -2.29
SNX3O60493 RNU6-111P-201ENST00000517179 105 ntBASIC0.75□□□□□ -2.29
SNX3O60493 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SNX3O60493 AC025627.3-201ENST00000582078 182 ntBASIC0.75□□□□□ -2.29
SNX3O60493 MIR3149-201ENST00000584629 83 ntBASIC0.75□□□□□ -2.29
SNX3O60493 AL359821.1-201ENST00000605519 182 ntBASIC0.75□□□□□ -2.29
SNX3O60493 AC091895.1-201ENST00000624494 256 ntBASIC0.75□□□□□ -2.29
SNX3O60493 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.75□□□□□ -2.29
SNX3O60493 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SNX3O60493 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
SNX3O60493 RNU6-369P-201ENST00000362515 102 ntBASIC0.74□□□□□ -2.29
SNX3O60493 SNORA1.1-201ENST00000364671 133 ntBASIC0.74□□□□□ -2.29
SNX3O60493 SNORA20.1-201ENST00000364790 130 ntBASIC0.74□□□□□ -2.29
SNX3O60493 Y_RNA.351-201ENST00000365436 96 ntBASIC0.74□□□□□ -2.29
SNX3O60493 Y_RNA.571-201ENST00000384753 98 ntBASIC0.74□□□□□ -2.29
SNX3O60493 RNU6-602P-201ENST00000411155 105 ntBASIC0.74□□□□□ -2.29
SNX3O60493 SNORD83.1-201ENST00000411362 77 ntBASIC0.74□□□□□ -2.29
SNX3O60493 RNU7-62P-201ENST00000458856 62 ntBASIC0.74□□□□□ -2.29
SNX3O60493 AC113410.1-201ENST00000505029 247 ntBASIC0.74□□□□□ -2.29
SNX3O60493 RNU4-71P-201ENST00000516258 113 ntBASIC0.74□□□□□ -2.29
SNX3O60493 AL365205.2-201ENST00000594586 68 ntBASIC0.74□□□□□ -2.29
SNX3O60493 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
SNX3O60493 uc_338.6-201ENST00000613544 171 ntBASIC0.74□□□□□ -2.29
SNX3O60493 Y_RNA.121-201ENST00000363309 113 ntBASIC0.73□□□□□ -2.29
SNX3O60493 Y_RNA.182-201ENST00000363880 111 ntBASIC0.73□□□□□ -2.29
SNX3O60493 RNU6-978P-201ENST00000364371 103 ntBASIC0.73□□□□□ -2.29
SNX3O60493 RNU6-934P-201ENST00000365154 107 ntBASIC0.73□□□□□ -2.29
SNX3O60493 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
SNX3O60493 Y_RNA.618-201ENST00000410949 107 ntBASIC0.73□□□□□ -2.29
SNX3O60493 AC015818.7-201ENST00000428754 109 ntBASIC0.73□□□□□ -2.29
SNX3O60493 AC087499.7-201ENST00000441958 109 ntBASIC0.73□□□□□ -2.29
SNX3O60493 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.73□□□□□ -2.29
SNX3O60493 MIR378D2-201ENST00000580636 98 ntBASIC0.73□□□□□ -2.29
SNX3O60493 MIR5197-201ENST00000583721 112 ntBASIC0.73□□□□□ -2.29
SNX3O60493 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
SNX3O60493 MIR6740-201ENST00000618268 113 ntBASIC0.73□□□□□ -2.29
SNX3O60493 RNU6-1292P-201ENST00000383856 107 ntBASIC0.72□□□□□ -2.29
SNX3O60493 RNU6-463P-201ENST00000384340 107 ntBASIC0.72□□□□□ -2.29
SNX3O60493 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.72□□□□□ -2.29
SNX3O60493 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
SNX3O60493 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
SNX3O60493 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
SNX3O60493 RNU7-45P-201ENST00000459460 63 ntBASIC0.72□□□□□ -2.29
SNX3O60493 SNORD116-25-201ENST00000516517 92 ntBASIC0.72□□□□□ -2.29
SNX3O60493 MIR4498-201ENST00000577599 66 ntBASIC0.72□□□□□ -2.29
SNX3O60493 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
SNX3O60493 MIR302B-201ENST00000362188 73 ntBASIC0.71□□□□□ -2.3
SNX3O60493 RNY1-201ENST00000364228 113 ntBASIC0.71□□□□□ -2.3
SNX3O60493 RNU4-70P-201ENST00000384579 139 ntBASIC0.71□□□□□ -2.3
SNX3O60493 SNORD105-201ENST00000386910 85 ntBASIC0.71□□□□□ -2.3
SNX3O60493 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.71□□□□□ -2.3
SNX3O60493 SEPT7P4-201ENST00000437076 306 ntBASIC0.71□□□□□ -2.3
SNX3O60493 RNU6-237P-201ENST00000515985 71 ntBASIC0.71□□□□□ -2.3
SNX3O60493 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
SNX3O60493 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
SNX3O60493 AL162730.1-201ENST00000605734 292 ntBASIC0.71□□□□□ -2.3
SNX3O60493 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
SNX3O60493 Y_RNA.144-201ENST00000363521 113 ntBASIC0.7□□□□□ -2.3
SNX3O60493 RNU6-643P-201ENST00000384018 107 ntBASIC0.7□□□□□ -2.3
SNX3O60493 MIR588-201ENST00000384900 83 ntBASIC0.7□□□□□ -2.3
SNX3O60493 SNORA26.6-201ENST00000391256 115 ntBASIC0.7□□□□□ -2.3
SNX3O60493 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.7□□□□□ -2.3
SNX3O60493 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.7□□□□□ -2.3
SNX3O60493 AC104465.1-201ENST00000611365 139 ntBASIC0.7□□□□□ -2.3
SNX3O60493 MIR6717-201ENST00000622747 73 ntBASIC0.7□□□□□ -2.3
SNX3O60493 AC091932.4-201ENST00000623386 200 ntBASIC0.7□□□□□ -2.3
SNX3O60493 RNU6-275P-201ENST00000364910 107 ntBASIC0.69□□□□□ -2.3
SNX3O60493 SNORD12C-201ENST00000386307 89 ntBASIC0.69□□□□□ -2.3
SNX3O60493 RNU6-918P-201ENST00000391219 106 ntBASIC0.69□□□□□ -2.3
SNX3O60493 snoU13.2-201ENST00000459201 104 ntBASIC0.69□□□□□ -2.3
SNX3O60493 RNU7-80P-201ENST00000459562 61 ntBASIC0.69□□□□□ -2.3
SNX3O60493 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.69□□□□□ -2.3
SNX3O60493 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.69□□□□□ -2.3
SNX3O60493 U6.106-201ENST00000636360 105 ntBASIC0.69□□□□□ -2.3
SNX3O60493 AL596211.1-201ENST00000569873 2277 ntBASIC0.69□□□□□ -2.3
SNX3O60493 AC010332.2-201ENST00000613083 1904 ntBASIC0.69□□□□□ -2.3
SNX3O60493 Y_RNA.412-201ENST00000384001 104 ntBASIC0.68□□□□□ -2.3
SNX3O60493 RNU6-1165P-201ENST00000410119 107 ntBASIC0.68□□□□□ -2.3
SNX3O60493 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
SNX3O60493 AL603825.1-201ENST00000438481 80 ntBASIC0.68□□□□□ -2.3
SNX3O60493 TRMT112P2-201ENST00000512910 132 ntBASIC0.68□□□□□ -2.3
SNX3O60493 RNU6-977P-201ENST00000516411 103 ntBASIC0.68□□□□□ -2.3
SNX3O60493 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
SNX3O60493 AC020891.4-201ENST00000605745 93 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms