Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.06□□□□□ -2.58
SSNA1O43805 MIR4436A-201ENST00000585278 85 ntBASIC-1.06□□□□□ -2.58
SSNA1O43805 PVT1_3.1-201ENST00000620853 95 ntBASIC-1.06□□□□□ -2.58
SSNA1O43805 AC138305.3-201ENST00000624988 240 ntBASIC-1.06□□□□□ -2.58
SSNA1O43805 MIR6841-201ENST00000637129 72 ntBASIC-1.06□□□□□ -2.58
SSNA1O43805 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.06□□□□□ -2.58
SSNA1O43805 SNORD114-14-201ENST00000362723 75 ntBASIC-1.07□□□□□ -2.58
SSNA1O43805 Y_RNA.116-201ENST00000363292 103 ntBASIC-1.07□□□□□ -2.58
SSNA1O43805 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
SSNA1O43805 RNU6-506P-201ENST00000516553 94 ntBASIC-1.07□□□□□ -2.58
SSNA1O43805 AC011712.1-201ENST00000588959 234 ntBASIC-1.07□□□□□ -2.58
SSNA1O43805 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 RNU6-763P-201ENST00000390865 106 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 AC096644.2-201ENST00000429278 159 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.08□□□□□ -2.58
SSNA1O43805 RNU6-397P-201ENST00000516226 104 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.08□□□□□ -2.58
SSNA1O43805 AC096720.1-201ENST00000604441 183 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 AC245008.1-201ENST00000608123 476 ntBASIC-1.08□□□□□ -2.58
SSNA1O43805 MIR367-201ENST00000362299 68 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 SNORA22.1-201ENST00000362701 134 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 RNY4P14-201ENST00000363656 96 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 RNU6-21P-201ENST00000384710 107 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 RNU2-16P-201ENST00000410712 136 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 AL022718.1-201ENST00000412004 84 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 AP003733.2-201ENST00000529409 171 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.09□□□□□ -2.58
SSNA1O43805 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.09□□□□□ -2.58
SSNA1O43805 AC091932.4-201ENST00000623386 200 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 U6.109-201ENST00000636749 87 ntBASIC-1.09□□□□□ -2.58
SSNA1O43805 RNU6-865P-201ENST00000364772 107 ntBASIC-1.1□□□□□ -2.59
SSNA1O43805 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.1□□□□□ -2.59
SSNA1O43805 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.1□□□□□ -2.59
SSNA1O43805 SNORA20-201ENST00000384662 132 ntBASIC-1.1□□□□□ -2.59
SSNA1O43805 RNU6-510P-201ENST00000391239 108 ntBASIC-1.1□□□□□ -2.59
SSNA1O43805 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.1□□□□□ -2.59
SSNA1O43805 RNU6-126P-201ENST00000516685 103 ntBASIC-1.1□□□□□ -2.59
SSNA1O43805 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.1□□□□□ -2.59
SSNA1O43805 MIR376A2-201ENST00000636782 80 ntBASIC-1.1□□□□□ -2.59
SSNA1O43805 RNU6-509P-201ENST00000363519 107 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 SNORA3B-201ENST00000391305 131 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 SNORD75.1-201ENST00000408373 60 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.11□□□□□ -2.59
SSNA1O43805 TRBVB-201ENST00000477100 408 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 MTCO2P24-201ENST00000515611 426 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.11□□□□□ -2.59
SSNA1O43805 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.12□□□□□ -2.59
SSNA1O43805 MTND3P8-201ENST00000412909 339 ntBASIC-1.12□□□□□ -2.59
SSNA1O43805 MTND1P14-201ENST00000427400 950 ntBASIC-1.12□□□□□ -2.59
SSNA1O43805 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.12□□□□□ -2.59
SSNA1O43805 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.12□□□□□ -2.59
SSNA1O43805 RNU6-191P-201ENST00000516295 94 ntBASIC-1.12□□□□□ -2.59
SSNA1O43805 RNA5SP66-201ENST00000517178 101 ntBASIC-1.12□□□□□ -2.59
SSNA1O43805 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.13□□□□□ -2.59
SSNA1O43805 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.13□□□□□ -2.59
SSNA1O43805 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.13□□□□□ -2.59
SSNA1O43805 RNU6-937P-201ENST00000384325 106 ntBASIC-1.13□□□□□ -2.59
SSNA1O43805 RNU7-188P-201ENST00000517063 64 ntBASIC-1.13□□□□□ -2.59
SSNA1O43805 MIR4724-201ENST00000579485 89 ntBASIC-1.13□□□□□ -2.59
SSNA1O43805 AC013791.1-201ENST00000616619 62 ntBASIC-1.13□□□□□ -2.59
SSNA1O43805 MTND5P32-201ENST00000560711 1802 ntBASIC-1.14□□□□□ -2.59
SSNA1O43805 Y_RNA.280-201ENST00000364765 112 ntBASIC-1.14□□□□□ -2.59
SSNA1O43805 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.14□□□□□ -2.59
SSNA1O43805 RNY3-201ENST00000365484 102 ntBASIC-1.14□□□□□ -2.59
SSNA1O43805 RNU6-890P-201ENST00000384121 107 ntBASIC-1.14□□□□□ -2.59
SSNA1O43805 RNU7-80P-201ENST00000459562 61 ntBASIC-1.14□□□□□ -2.59
SSNA1O43805 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 RNA5SP98-201ENST00000363158 137 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 RNU6-923P-201ENST00000364753 107 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 SNORD63-201ENST00000384262 68 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 RNU6-310P-201ENST00000384655 107 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 MIR181A1-201ENST00000385026 110 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 MIR518E-201ENST00000385252 88 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 RNU4-14P-201ENST00000410858 122 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.15□□□□□ -2.59
SSNA1O43805 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 RNU7-79P-201ENST00000516082 62 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.15□□□□□ -2.59
SSNA1O43805 AC021613.1-201ENST00000623880 111 ntBASIC-1.15□□□□□ -2.59
SSNA1O43805 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.15□□□□□ -2.59
SSNA1O43805 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.16□□□□□ -2.6
SSNA1O43805 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.16□□□□□ -2.6
SSNA1O43805 RNU6-764P-201ENST00000516396 105 ntBASIC-1.16□□□□□ -2.6
SSNA1O43805 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.16□□□□□ -2.6
SSNA1O43805 RNA5SP169-201ENST00000517268 117 ntBASIC-1.16□□□□□ -2.6
SSNA1O43805 VN1R91P-201ENST00000594377 169 ntBASIC-1.16□□□□□ -2.6
SSNA1O43805 Y_RNA.122-201ENST00000363331 96 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 RNY1P2-201ENST00000364820 117 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 MIR1287-201ENST00000408492 90 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms