Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAF3IP2O43734 RPS29P24-201ENST00000486345 171 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAF3IP2O43734 Y_RNA.668-201ENST00000516233 93 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 RNU6-1045P-201ENST00000516321 107 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 SNORA18.4-201ENST00000516440 124 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 RNU6-1270P-201ENST00000517128 108 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 AC133485.1-201ENST00000567176 124 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 AC138907.6-201ENST00000568401 126 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 AC025627.3-201ENST00000582078 182 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 AP000753.3-201ENST00000604083 169 ntBASIC0.6□□□□□ -2.31
TRAF3IP2O43734 Y_RNA.91-201ENST00000363042 107 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 SNORD45.3-201ENST00000363836 72 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 Y_RNA.416-201ENST00000384014 113 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 Y_RNA.478-201ENST00000384358 107 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 Y_RNA.542-201ENST00000384641 111 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 SNRPGP8-201ENST00000454064 226 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 RNU7-67P-201ENST00000459003 62 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 RNU7-96P-201ENST00000459535 64 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 SCARNA15.1-201ENST00000516384 125 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 MIR4643-201ENST00000577473 78 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.31
TRAF3IP2O43734 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.32
TRAF3IP2O43734 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.162-201ENST00000363683 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.292-201ENST00000364904 97 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.494-201ENST00000384432 111 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 SNORA2B-201ENST00000384583 137 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 MIR608-201ENST00000384820 100 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 MT-TT-201ENST00000387460 66 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 MIR1827-201ENST00000408549 66 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 RNU6-994P-201ENST00000410507 111 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 SNORD36C-201ENST00000516733 66 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 RNU6-453P-201ENST00000516819 85 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 Z97988.1-201ENST00000637697 135 ntBASIC0.58□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.20-201ENST00000362479 113 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.76-201ENST00000362931 109 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.205-201ENST00000364128 113 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.277-201ENST00000364754 102 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 RNU6-728P-201ENST00000365375 104 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 RNY1P4-201ENST00000384595 115 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 SNORA79-201ENST00000408376 140 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.622-201ENST00000411091 108 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAF3IP2O43734 AL035398.1-201ENST00000430869 322 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 AF228730.3-201ENST00000436691 102 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 AC113410.1-201ENST00000505029 247 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 RNU6-998P-201ENST00000515894 101 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAF3IP2O43734 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 MIR8055-201ENST00000610739 97 ntBASIC0.57□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.54-201ENST00000362766 105 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.121-201ENST00000363309 113 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 RNA5SP325-201ENST00000363756 130 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.199-201ENST00000364014 102 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 RNY4P28-201ENST00000365281 93 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 RNU6-1189P-201ENST00000383958 107 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.440-201ENST00000384120 114 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 RNU6-125P-201ENST00000384505 107 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 SNORD89-201ENST00000390981 114 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAF3IP2O43734 RNU6-958P-201ENST00000516995 106 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 AL365205.2-201ENST00000594586 68 ntBASIC0.56□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.350-201ENST00000365409 98 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 RNU6-1292P-201ENST00000383856 107 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 MIR568-201ENST00000385036 95 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 MIR605-201ENST00000385078 83 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
TRAF3IP2O43734 RNU6-913P-201ENST00000390913 95 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 SNORD77.3-201ENST00000391113 65 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 RNA5SP95-201ENST00000410319 137 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAF3IP2O43734 MTND1P19-201ENST00000511780 315 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 MIR4744-201ENST00000581563 82 ntBASIC0.55□□□□□ -2.32
TRAF3IP2O43734 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TRAF3IP2O43734 MIR1-1-201ENST00000362147 71 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.23-201ENST00000362496 106 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TRAF3IP2O43734 RNU6-110P-201ENST00000384508 104 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 SNORD38B-201ENST00000384690 67 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 MIR548I3-201ENST00000408378 149 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 RNU4-71P-201ENST00000516258 113 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 MIR5197-201ENST00000583721 112 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 AC062037.2-201ENST00000610137 73 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 U4.1-201ENST00000620349 87 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 SNORD38B-202ENST00000625943 69 ntBASIC0.54□□□□□ -2.32
TRAF3IP2O43734 Y_RNA.7-201ENST00000362352 102 ntBASIC0.53□□□□□ -2.32
TRAF3IP2O43734 SNORA1.1-201ENST00000364671 133 ntBASIC0.53□□□□□ -2.32
TRAF3IP2O43734 SNORA1-201ENST00000384107 130 ntBASIC0.53□□□□□ -2.32
TRAF3IP2O43734 AC090844.1-201ENST00000422019 156 ntBASIC0.53□□□□□ -2.32
TRAF3IP2O43734 AC244023.1-201ENST00000426884 112 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms