Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 RNU7-96P-201ENST00000459535 64 ntBASIC1.36□□□□□ -2.19
NCK2O43639 RPS29P24-201ENST00000486345 171 ntBASIC1.36□□□□□ -2.19
NCK2O43639 AP002392.1-201ENST00000537692 208 ntBASIC1.36□□□□□ -2.19
NCK2O43639 U6.106-201ENST00000636360 105 ntBASIC1.36□□□□□ -2.19
NCK2O43639 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NCK2O43639 RNU6-47P-201ENST00000383866 107 ntBASIC1.35□□□□□ -2.19
NCK2O43639 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
NCK2O43639 RNU7-73P-201ENST00000458743 63 ntBASIC1.35□□□□□ -2.19
NCK2O43639 RPS29P1-201ENST00000465274 159 ntBASIC1.35□□□□□ -2.19
NCK2O43639 RNU6-138P-201ENST00000515952 107 ntBASIC1.35□□□□□ -2.19
NCK2O43639 SNORA18.4-201ENST00000516440 124 ntBASIC1.35□□□□□ -2.19
NCK2O43639 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
NCK2O43639 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
NCK2O43639 MIR548J-201ENST00000408833 112 ntBASIC1.34□□□□□ -2.19
NCK2O43639 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.34□□□□□ -2.19
NCK2O43639 AL392103.1-201ENST00000447000 198 ntBASIC1.34□□□□□ -2.19
NCK2O43639 RNU7-67P-201ENST00000459003 62 ntBASIC1.34□□□□□ -2.19
NCK2O43639 RNU7-120P-201ENST00000459334 63 ntBASIC1.34□□□□□ -2.19
NCK2O43639 RNU7-21P-201ENST00000459430 62 ntBASIC1.34□□□□□ -2.19
NCK2O43639 AC107027.2-201ENST00000512197 115 ntBASIC1.34□□□□□ -2.19
NCK2O43639 MIR5197-201ENST00000583721 112 ntBASIC1.34□□□□□ -2.19
NCK2O43639 SEPT14P17-201ENST00000617978 177 ntBASIC1.34□□□□□ -2.19
NCK2O43639 MTND1P7-201ENST00000632801 297 ntBASIC1.34□□□□□ -2.19
NCK2O43639 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
NCK2O43639 RNU1-124P-201ENST00000363861 145 ntBASIC1.33□□□□□ -2.2
NCK2O43639 SNORA25.7-201ENST00000364375 127 ntBASIC1.33□□□□□ -2.2
NCK2O43639 RNU6-597P-201ENST00000365620 102 ntBASIC1.33□□□□□ -2.2
NCK2O43639 SNORA1-201ENST00000384107 130 ntBASIC1.33□□□□□ -2.2
NCK2O43639 Y_RNA.440-201ENST00000384120 114 ntBASIC1.33□□□□□ -2.2
NCK2O43639 MIR19B1-201ENST00000384829 87 ntBASIC1.33□□□□□ -2.2
NCK2O43639 SNORD77.3-201ENST00000391113 65 ntBASIC1.33□□□□□ -2.2
NCK2O43639 RNU7-90P-201ENST00000459216 62 ntBASIC1.33□□□□□ -2.2
NCK2O43639 MIR2115-201ENST00000516657 100 ntBASIC1.33□□□□□ -2.2
NCK2O43639 SNORD36C-201ENST00000516733 66 ntBASIC1.33□□□□□ -2.2
NCK2O43639 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NCK2O43639 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NCK2O43639 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
NCK2O43639 RNU6-396P-201ENST00000365369 105 ntBASIC1.32□□□□□ -2.2
NCK2O43639 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
NCK2O43639 Y_RNA.454-201ENST00000384224 113 ntBASIC1.32□□□□□ -2.2
NCK2O43639 MIR624-201ENST00000385217 97 ntBASIC1.32□□□□□ -2.2
NCK2O43639 MIR1185-1-201ENST00000408598 86 ntBASIC1.32□□□□□ -2.2
NCK2O43639 RNA5SP127-201ENST00000411051 133 ntBASIC1.32□□□□□ -2.2
NCK2O43639 AC063976.4-201ENST00000421971 163 ntBASIC1.32□□□□□ -2.2
NCK2O43639 AL035398.1-201ENST00000430869 322 ntBASIC1.32□□□□□ -2.2
NCK2O43639 RNU7-80P-201ENST00000459562 61 ntBASIC1.32□□□□□ -2.2
NCK2O43639 SNORA81.3-201ENST00000517283 198 ntBASIC1.32□□□□□ -2.2
NCK2O43639 MIR3129-201ENST00000581095 76 ntBASIC1.32□□□□□ -2.2
NCK2O43639 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
NCK2O43639 RNA5SP325-201ENST00000363756 130 ntBASIC1.31□□□□□ -2.2
NCK2O43639 Y_RNA.240-201ENST00000364469 95 ntBASIC1.31□□□□□ -2.2
NCK2O43639 MIR570-201ENST00000384917 97 ntBASIC1.31□□□□□ -2.2
NCK2O43639 AC006461.1-201ENST00000412637 326 ntBASIC1.31□□□□□ -2.2
NCK2O43639 MRPL35P3-201ENST00000421557 364 ntBASIC1.31□□□□□ -2.2
NCK2O43639 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
NCK2O43639 RPS23P4-201ENST00000487908 423 ntBASIC1.31□□□□□ -2.2
NCK2O43639 RNU6-998P-201ENST00000515894 101 ntBASIC1.31□□□□□ -2.2
NCK2O43639 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NCK2O43639 SNORA25.3-201ENST00000363205 127 ntBASIC1.3□□□□□ -2.2
NCK2O43639 Y_RNA.337-201ENST00000365312 102 ntBASIC1.3□□□□□ -2.2
NCK2O43639 Y_RNA.357-201ENST00000365487 109 ntBASIC1.3□□□□□ -2.2
NCK2O43639 MT-TN-201ENST00000387400 73 ntBASIC1.3□□□□□ -2.2
NCK2O43639 SNORA75.2-201ENST00000391138 150 ntBASIC1.3□□□□□ -2.2
NCK2O43639 SNORA75.3-201ENST00000391231 150 ntBASIC1.3□□□□□ -2.2
NCK2O43639 RNU6-1219P-201ENST00000516143 112 ntBASIC1.3□□□□□ -2.2
NCK2O43639 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
NCK2O43639 RNU6-113P-201ENST00000516653 101 ntBASIC1.3□□□□□ -2.2
NCK2O43639 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
NCK2O43639 RNU6-794P-201ENST00000517261 64 ntBASIC1.3□□□□□ -2.2
NCK2O43639 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.3□□□□□ -2.2
NCK2O43639 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.3□□□□□ -2.2
NCK2O43639 Y_RNA.393-201ENST00000383936 102 ntBASIC1.29□□□□□ -2.2
NCK2O43639 Y_RNA.494-201ENST00000384432 111 ntBASIC1.29□□□□□ -2.2
NCK2O43639 Y_RNA.521-201ENST00000384560 114 ntBASIC1.29□□□□□ -2.2
NCK2O43639 MIR1302-7-201ENST00000408841 72 ntBASIC1.29□□□□□ -2.2
NCK2O43639 RNU6-613P-201ENST00000410412 108 ntBASIC1.29□□□□□ -2.2
NCK2O43639 RNA5SP261-201ENST00000410536 106 ntBASIC1.29□□□□□ -2.2
NCK2O43639 RNU6-182P-201ENST00000516970 105 ntBASIC1.29□□□□□ -2.2
NCK2O43639 RNU6-958P-201ENST00000516995 106 ntBASIC1.29□□□□□ -2.2
NCK2O43639 MIR548AO-201ENST00000579992 96 ntBASIC1.29□□□□□ -2.2
NCK2O43639 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NCK2O43639 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NCK2O43639 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
NCK2O43639 MIR200A-201ENST00000384875 90 ntBASIC1.28□□□□□ -2.2
NCK2O43639 AC002429.1-201ENST00000437672 148 ntBASIC1.28□□□□□ -2.2
NCK2O43639 MIR3646-201ENST00000578301 84 ntBASIC1.28□□□□□ -2.2
NCK2O43639 MIR377-201ENST00000362145 69 ntBASIC1.27□□□□□ -2.21
NCK2O43639 Y_RNA.662-201ENST00000516028 97 ntBASIC1.27□□□□□ -2.21
NCK2O43639 AC004792.1-201ENST00000614523 137 ntBASIC1.27□□□□□ -2.21
NCK2O43639 RNU6-1318P-201ENST00000365389 103 ntBASIC1.26□□□□□ -2.21
NCK2O43639 Y_RNA.351-201ENST00000365436 96 ntBASIC1.26□□□□□ -2.21
NCK2O43639 RNU6-239P-201ENST00000390990 99 ntBASIC1.26□□□□□ -2.21
NCK2O43639 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
NCK2O43639 RNU6-1135P-201ENST00000411083 103 ntBASIC1.26□□□□□ -2.21
NCK2O43639 SEPT7P4-201ENST00000437076 306 ntBASIC1.26□□□□□ -2.21
NCK2O43639 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.26□□□□□ -2.21
NCK2O43639 Z97988.1-201ENST00000637697 135 ntBASIC1.26□□□□□ -2.21
NCK2O43639 AC008163.1-202ENST00000636004 2889 ntBASIC1.26□□□□□ -2.21
NCK2O43639 MIR302B-201ENST00000362188 73 ntBASIC1.25□□□□□ -2.21
NCK2O43639 RNU4-84P-201ENST00000364200 139 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms