Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNU6-1135P-201ENST00000411083 103 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 snoU13.25-201ENST00000458945 104 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 RNU7-67P-201ENST00000459003 62 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 RNU7-96P-201ENST00000459535 64 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 RNU7-121P-201ENST00000516604 62 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 AP003716.2-201ENST00000528260 108 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 MIR5197-201ENST00000583721 112 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 AL022345.2-201ENST00000606307 135 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 MIR376A2-201ENST00000636782 80 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 RNU6-1336P-201ENST00000383886 109 ntBASIC1.48□□□□□ -2.17
PRPF3O43395 Y_RNA.555-201ENST00000384673 110 ntBASIC1.48□□□□□ -2.17
PRPF3O43395 PCNPP3-201ENST00000393579 471 ntBASIC1.48□□□□□ -2.17
PRPF3O43395 MIR1276-201ENST00000408707 83 ntBASIC1.48□□□□□ -2.17
PRPF3O43395 RPS29P24-201ENST00000486345 171 ntBASIC1.48□□□□□ -2.17
PRPF3O43395 MIR103A2-201ENST00000362154 78 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 SNORA25.3-201ENST00000363205 127 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 Y_RNA.454-201ENST00000384224 113 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 MIR222-201ENST00000384992 110 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 RNU6-910P-201ENST00000390844 107 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 RNU7-73P-201ENST00000458743 63 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 RNU7-80P-201ENST00000459562 61 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 SNORD79.1-201ENST00000516069 84 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 DNAJC19P2-201ENST00000593340 302 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 MTND1P7-201ENST00000632801 297 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 MIR6844-201ENST00000637122 62 ntBASIC1.47□□□□□ -2.17
PRPF3O43395 RNA5SP327-201ENST00000362494 101 ntBASIC1.46□□□□□ -2.18
PRPF3O43395 Y_RNA.191-201ENST00000363972 113 ntBASIC1.46□□□□□ -2.18
PRPF3O43395 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
PRPF3O43395 RNU6-958P-201ENST00000516995 106 ntBASIC1.46□□□□□ -2.18
PRPF3O43395 AC104465.1-201ENST00000611365 139 ntBASIC1.46□□□□□ -2.18
PRPF3O43395 AC027335.2-201ENST00000624030 375 ntBASIC1.46□□□□□ -2.18
PRPF3O43395 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PRPF3O43395 RNU6-1082P-201ENST00000364574 107 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 RNU6-396P-201ENST00000365369 105 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 SNORD37.2-201ENST00000391075 66 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 SNORA75.5-201ENST00000391291 81 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 RNA5SP261-201ENST00000410536 106 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.45□□□□□ -2.18
PRPF3O43395 MIR2115-201ENST00000516657 100 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 MIR3646-201ENST00000578301 84 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 SEPT14P17-201ENST00000617978 177 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 MIR3658-201ENST00000636291 56 ntBASIC1.45□□□□□ -2.18
PRPF3O43395 MIR342-201ENST00000362212 99 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 Y_RNA.351-201ENST00000365436 96 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 MIR19B1-201ENST00000384829 87 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 MRPL35P3-201ENST00000421557 364 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 AL035398.1-201ENST00000430869 322 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 RNU6-998P-201ENST00000515894 101 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 MIR548AO-201ENST00000579992 96 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
PRPF3O43395 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRPF3O43395 RNU1-124P-201ENST00000363861 145 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 RNU6-818P-201ENST00000364837 108 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 MT-TN-201ENST00000387400 73 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 RNU6-394P-201ENST00000410735 107 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 AL392103.1-201ENST00000447000 198 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 RNU7-21P-201ENST00000459430 62 ntBASIC1.43□□□□□ -2.18
PRPF3O43395 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
PRPF3O43395 Y_RNA.8-201ENST00000362353 102 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 Y_RNA.180-201ENST00000363867 113 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 RNU6-449P-201ENST00000383914 107 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 RNU6-804P-201ENST00000384286 107 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 Y_RNA.580-201ENST00000391004 95 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 RNU6-588P-201ENST00000410281 105 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 AC063976.4-201ENST00000421971 163 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 RNU2-11P-201ENST00000459191 187 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 RNU7-70P-201ENST00000516941 66 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.42□□□□□ -2.18
PRPF3O43395 SNORA4-201ENST00000584302 138 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 AL078603.1-201ENST00000603824 313 ntBASIC1.42□□□□□ -2.18
PRPF3O43395 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PRPF3O43395 MIR302B-201ENST00000362188 73 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 Y_RNA.363-201ENST00000365529 113 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 SNORD116-18-201ENST00000383961 92 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 RNU6-42P-201ENST00000384165 107 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 MIR200A-201ENST00000384875 90 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 MIR1185-1-201ENST00000408598 86 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 RPS23P4-201ENST00000487908 423 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 RNU7-40P-201ENST00000516397 64 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 RNU6-1149P-201ENST00000516810 97 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.41□□□□□ -2.18
PRPF3O43395 MIR3144-201ENST00000579460 79 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 MIR4452-201ENST00000583004 71 ntBASIC1.41□□□□□ -2.18
PRPF3O43395 Y_RNA.52-201ENST00000362760 96 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 RNU4-11P-201ENST00000365287 132 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 RNU6-1130P-201ENST00000365434 107 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 MIR1302-7-201ENST00000408841 72 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 RNU6-613P-201ENST00000410412 108 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 RNA5SP220-201ENST00000516298 104 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 SCARNA15-202ENST00000516881 127 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 AC131055.1-201ENST00000584626 316 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms