Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 Y_RNA.396-201ENST00000383949 103 ntBASIC0.46□□□□□ -2.34
MSH4O15457 RNU6-1160P-201ENST00000384546 104 ntBASIC0.46□□□□□ -2.34
MSH4O15457 MIR193B-201ENST00000384907 83 ntBASIC0.46□□□□□ -2.34
MSH4O15457 AL606845.1-201ENST00000404881 255 ntBASIC0.46□□□□□ -2.34
MSH4O15457 RNU2-70P-201ENST00000410718 179 ntBASIC0.46□□□□□ -2.34
MSH4O15457 SNRPGP8-201ENST00000454064 226 ntBASIC0.46□□□□□ -2.34
MSH4O15457 RNU6-561P-201ENST00000516222 102 ntBASIC0.46□□□□□ -2.34
MSH4O15457 MIR4643-201ENST00000577473 78 ntBASIC0.46□□□□□ -2.34
MSH4O15457 AC006504.6-201ENST00000590142 199 ntBASIC0.46□□□□□ -2.34
MSH4O15457 Z83818.1-201ENST00000603584 150 ntBASIC0.46□□□□□ -2.34
MSH4O15457 SNORD115-40-201ENST00000606510 82 ntBASIC0.46□□□□□ -2.34
MSH4O15457 uc_338.6-201ENST00000613544 171 ntBASIC0.46□□□□□ -2.34
MSH4O15457 U2.14-201ENST00000615943 113 ntBASIC0.46□□□□□ -2.34
MSH4O15457 AC010487.4-201ENST00000637027 61 ntBASIC0.46□□□□□ -2.34
MSH4O15457 Y_RNA.7-201ENST00000362352 102 ntBASIC0.45□□□□□ -2.34
MSH4O15457 RNU6-369P-201ENST00000362515 102 ntBASIC0.45□□□□□ -2.34
MSH4O15457 Y_RNA.66-201ENST00000362862 102 ntBASIC0.45□□□□□ -2.34
MSH4O15457 RNU6-1309P-201ENST00000363305 108 ntBASIC0.45□□□□□ -2.34
MSH4O15457 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
MSH4O15457 Y_RNA.199-201ENST00000364014 102 ntBASIC0.45□□□□□ -2.34
MSH4O15457 SNORA63C-201ENST00000364578 129 ntBASIC0.45□□□□□ -2.34
MSH4O15457 Y_RNA.277-201ENST00000364754 102 ntBASIC0.45□□□□□ -2.34
MSH4O15457 Y_RNA.634-201ENST00000364811 113 ntBASIC0.45□□□□□ -2.34
MSH4O15457 RNU6-472P-201ENST00000384299 107 ntBASIC0.45□□□□□ -2.34
MSH4O15457 SNORA27-201ENST00000384323 126 ntBASIC0.45□□□□□ -2.34
MSH4O15457 Y_RNA.574-201ENST00000384766 95 ntBASIC0.45□□□□□ -2.34
MSH4O15457 SNORA40.5-201ENST00000391061 128 ntBASIC0.45□□□□□ -2.34
MSH4O15457 RNU6-1190P-201ENST00000410811 104 ntBASIC0.45□□□□□ -2.34
MSH4O15457 snoU13.16-201ENST00000459350 104 ntBASIC0.45□□□□□ -2.34
MSH4O15457 RNU6-1299P-201ENST00000516316 100 ntBASIC0.45□□□□□ -2.34
MSH4O15457 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.45□□□□□ -2.34
MSH4O15457 MIR4662B-201ENST00000579498 81 ntBASIC0.45□□□□□ -2.34
MSH4O15457 AP000942.4-201ENST00000604811 241 ntBASIC0.45□□□□□ -2.34
MSH4O15457 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
MSH4O15457 AL365265.1-201ENST00000621045 234 ntBASIC0.45□□□□□ -2.34
MSH4O15457 RNU6-888P-201ENST00000363010 101 ntBASIC0.44□□□□□ -2.34
MSH4O15457 Y_RNA.304-201ENST00000365011 112 ntBASIC0.44□□□□□ -2.34
MSH4O15457 RNU6-934P-201ENST00000365154 107 ntBASIC0.44□□□□□ -2.34
MSH4O15457 RNY1P8-201ENST00000383970 114 ntBASIC0.44□□□□□ -2.34
MSH4O15457 RNU6-484P-201ENST00000384016 107 ntBASIC0.44□□□□□ -2.34
MSH4O15457 Y_RNA.422-201ENST00000384054 114 ntBASIC0.44□□□□□ -2.34
MSH4O15457 SNORA24-201ENST00000384096 131 ntBASIC0.44□□□□□ -2.34
MSH4O15457 SNORA1-201ENST00000384107 130 ntBASIC0.44□□□□□ -2.34
MSH4O15457 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
MSH4O15457 AC087499.4-201ENST00000448505 178 ntBASIC0.44□□□□□ -2.34
MSH4O15457 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.44□□□□□ -2.34
MSH4O15457 SNORD2.1-201ENST00000458762 69 ntBASIC0.44□□□□□ -2.34
MSH4O15457 RNY3P16-201ENST00000516338 101 ntBASIC0.44□□□□□ -2.34
MSH4O15457 RNU6-977P-201ENST00000516411 103 ntBASIC0.44□□□□□ -2.34
MSH4O15457 RNU6-504P-201ENST00000516568 104 ntBASIC0.44□□□□□ -2.34
MSH4O15457 MIR4771-2-201ENST00000577758 74 ntBASIC0.44□□□□□ -2.34
MSH4O15457 MIR5688-201ENST00000580619 83 ntBASIC0.44□□□□□ -2.34
MSH4O15457 MIR4771-1-201ENST00000582617 74 ntBASIC0.44□□□□□ -2.34
MSH4O15457 MIR4264-201ENST00000583520 66 ntBASIC0.44□□□□□ -2.34
MSH4O15457 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
MSH4O15457 Y_RNA.23-201ENST00000362496 106 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.47-201ENST00000362697 108 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.76-201ENST00000362931 109 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.82-201ENST00000363000 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.92-201ENST00000363043 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 SNORA63-201ENST00000363450 132 ntBASIC0.43□□□□□ -2.34
MSH4O15457 RNU6-694P-201ENST00000364071 147 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.235-201ENST00000364412 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.306-201ENST00000365015 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.312-201ENST00000365089 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.322-201ENST00000365151 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 SNORD24-201ENST00000383884 75 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.432-201ENST00000384087 111 ntBASIC0.43□□□□□ -2.34
MSH4O15457 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.459-201ENST00000384251 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 MIR520F-201ENST00000384824 87 ntBASIC0.43□□□□□ -2.34
MSH4O15457 MIR573-201ENST00000384964 99 ntBASIC0.43□□□□□ -2.34
MSH4O15457 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
MSH4O15457 MIR548F4-201ENST00000408515 105 ntBASIC0.43□□□□□ -2.34
MSH4O15457 RNU2-38P-201ENST00000410856 79 ntBASIC0.43□□□□□ -2.34
MSH4O15457 RNU7-62P-201ENST00000458856 62 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.650-201ENST00000459002 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 RNU2-11P-201ENST00000459191 187 ntBASIC0.43□□□□□ -2.34
MSH4O15457 RNU7-45P-201ENST00000459460 63 ntBASIC0.43□□□□□ -2.34
MSH4O15457 RPS29P24-201ENST00000486345 171 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.777-201ENST00000516982 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.771-201ENST00000598668 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 MIR8055-201ENST00000610739 97 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.812-201ENST00000610788 101 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.784-201ENST00000613803 101 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.787-201ENST00000616522 101 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.780-201ENST00000617336 101 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.801-201ENST00000619005 101 ntBASIC0.43□□□□□ -2.34
MSH4O15457 Y_RNA.789-201ENST00000622480 102 ntBASIC0.43□□□□□ -2.34
MSH4O15457 MIR376A2-201ENST00000636782 80 ntBASIC0.43□□□□□ -2.34
MSH4O15457 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.42□□□□□ -2.34
MSH4O15457 MIR335-201ENST00000362173 94 ntBASIC0.42□□□□□ -2.34
MSH4O15457 RNA5SP325-201ENST00000363756 130 ntBASIC0.42□□□□□ -2.34
MSH4O15457 Y_RNA.176-201ENST00000363815 109 ntBASIC0.42□□□□□ -2.34
MSH4O15457 SNORD38B-201ENST00000384690 67 ntBASIC0.42□□□□□ -2.34
MSH4O15457 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.42□□□□□ -2.34
MSH4O15457 RNU6-177P-201ENST00000411257 104 ntBASIC0.42□□□□□ -2.34
MSH4O15457 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.42□□□□□ -2.34
MSH4O15457 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
MSH4O15457 MIR1273G-201ENST00000577677 100 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms