Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-1309P-201ENST00000363305 108 ntBASIC0.36□□□□□ -2.35
CUX2O14529 Y_RNA.419-201ENST00000384041 102 ntBASIC0.36□□□□□ -2.35
CUX2O14529 SNORA24-201ENST00000384096 131 ntBASIC0.36□□□□□ -2.35
CUX2O14529 Y_RNA.645-201ENST00000391229 102 ntBASIC0.36□□□□□ -2.35
CUX2O14529 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
CUX2O14529 AC015818.7-201ENST00000428754 109 ntBASIC0.36□□□□□ -2.35
CUX2O14529 AC087499.7-201ENST00000441958 109 ntBASIC0.36□□□□□ -2.35
CUX2O14529 RNU7-73P-201ENST00000458743 63 ntBASIC0.36□□□□□ -2.35
CUX2O14529 SNORA25.12-201ENST00000516202 82 ntBASIC0.36□□□□□ -2.35
CUX2O14529 RNY3P15-201ENST00000516297 97 ntBASIC0.36□□□□□ -2.35
CUX2O14529 RNU6-504P-201ENST00000516568 104 ntBASIC0.36□□□□□ -2.35
CUX2O14529 RNU6-126P-201ENST00000516685 103 ntBASIC0.36□□□□□ -2.35
CUX2O14529 SNORA40.15-201ENST00000516884 107 ntBASIC0.36□□□□□ -2.35
CUX2O14529 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.36□□□□□ -2.35
CUX2O14529 AC020891.4-201ENST00000605745 93 ntBASIC0.36□□□□□ -2.35
CUX2O14529 Y_RNA.804-201ENST00000615262 101 ntBASIC0.36□□□□□ -2.35
CUX2O14529 Y_RNA.37-201ENST00000362606 108 ntBASIC0.35□□□□□ -2.35
CUX2O14529 RNU6-770P-201ENST00000363929 105 ntBASIC0.35□□□□□ -2.35
CUX2O14529 RNU4-45P-201ENST00000365469 141 ntBASIC0.35□□□□□ -2.35
CUX2O14529 RNU6-326P-201ENST00000365480 107 ntBASIC0.35□□□□□ -2.35
CUX2O14529 MTCO2P24-201ENST00000515611 426 ntBASIC0.35□□□□□ -2.35
CUX2O14529 SNORA27.4-201ENST00000516650 95 ntBASIC0.35□□□□□ -2.35
CUX2O14529 RNU7-53P-201ENST00000516705 60 ntBASIC0.35□□□□□ -2.35
CUX2O14529 MIR5688-201ENST00000580619 83 ntBASIC0.35□□□□□ -2.35
CUX2O14529 snoU18.1-201ENST00000629629 71 ntBASIC0.35□□□□□ -2.35
CUX2O14529 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
CUX2O14529 MIR101-1-201ENST00000362265 75 ntBASIC0.35□□□□□ -2.35
CUX2O14529 RNU6-102P-201ENST00000384485 104 ntBASIC0.35□□□□□ -2.35
CUX2O14529 Y_RNA.639-201ENST00000458981 102 ntBASIC0.35□□□□□ -2.35
CUX2O14529 RNU6-988P-201ENST00000519081 107 ntBASIC0.35□□□□□ -2.35
CUX2O14529 AC007751.1-201ENST00000529260 376 ntBASIC0.35□□□□□ -2.35
CUX2O14529 AC092634.7-201ENST00000621022 103 ntBASIC0.35□□□□□ -2.35
CUX2O14529 Y_RNA.31-201ENST00000362574 102 ntBASIC0.34□□□□□ -2.36
CUX2O14529 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
CUX2O14529 Y_RNA.380-201ENST00000365663 111 ntBASIC0.34□□□□□ -2.36
CUX2O14529 Y_RNA.394-201ENST00000383942 103 ntBASIC0.34□□□□□ -2.36
CUX2O14529 RNU6-514P-201ENST00000384208 107 ntBASIC0.34□□□□□ -2.36
CUX2O14529 RNY3P14-201ENST00000384309 102 ntBASIC0.34□□□□□ -2.36
CUX2O14529 MIR588-201ENST00000384900 83 ntBASIC0.34□□□□□ -2.36
CUX2O14529 BTF3P11-201ENST00000426582 477 ntBASIC0.34□□□□□ -2.36
CUX2O14529 SNORA18.4-201ENST00000516440 124 ntBASIC0.34□□□□□ -2.36
CUX2O14529 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.34□□□□□ -2.36
CUX2O14529 AC006006.1-201ENST00000603082 144 ntBASIC0.34□□□□□ -2.36
CUX2O14529 SNORA25.1-201ENST00000362326 128 ntBASIC0.33□□□□□ -2.36
CUX2O14529 Y_RNA.152-201ENST00000363578 100 ntBASIC0.33□□□□□ -2.36
CUX2O14529 RNU6-450P-201ENST00000364654 107 ntBASIC0.33□□□□□ -2.36
CUX2O14529 RNA5SP117-201ENST00000365294 118 ntBASIC0.33□□□□□ -2.36
CUX2O14529 RNY1P8-201ENST00000383970 114 ntBASIC0.33□□□□□ -2.36
CUX2O14529 RNU6-662P-201ENST00000384253 104 ntBASIC0.33□□□□□ -2.36
CUX2O14529 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
CUX2O14529 RNU6-1143P-201ENST00000516125 104 ntBASIC0.33□□□□□ -2.36
CUX2O14529 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
CUX2O14529 AP000942.4-201ENST00000604811 241 ntBASIC0.33□□□□□ -2.36
CUX2O14529 Y_RNA.802-201ENST00000614892 130 ntBASIC0.33□□□□□ -2.36
CUX2O14529 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CUX2O14529 Y_RNA.28-201ENST00000362554 111 ntBASIC0.32□□□□□ -2.36
CUX2O14529 SNORA1.1-201ENST00000364671 133 ntBASIC0.32□□□□□ -2.36
CUX2O14529 SNORD61-201ENST00000384252 73 ntBASIC0.32□□□□□ -2.36
CUX2O14529 MIR518F-201ENST00000384973 87 ntBASIC0.32□□□□□ -2.36
CUX2O14529 Y_RNA.581-201ENST00000391017 97 ntBASIC0.32□□□□□ -2.36
CUX2O14529 SNORD77.3-201ENST00000391113 65 ntBASIC0.32□□□□□ -2.36
CUX2O14529 SNORD77.4-201ENST00000516158 81 ntBASIC0.32□□□□□ -2.36
CUX2O14529 RNU7-156P-201ENST00000517214 74 ntBASIC0.32□□□□□ -2.36
CUX2O14529 AL021707.8-201ENST00000609428 183 ntBASIC0.32□□□□□ -2.36
CUX2O14529 MIR342-201ENST00000362212 99 ntBASIC0.31□□□□□ -2.36
CUX2O14529 Y_RNA.24-201ENST00000362508 103 ntBASIC0.31□□□□□ -2.36
CUX2O14529 SNORD42.2-201ENST00000365570 69 ntBASIC0.31□□□□□ -2.36
CUX2O14529 MIR215-201ENST00000384858 110 ntBASIC0.31□□□□□ -2.36
CUX2O14529 RNU6-913P-201ENST00000390913 95 ntBASIC0.31□□□□□ -2.36
CUX2O14529 SNORA26-201ENST00000391286 122 ntBASIC0.31□□□□□ -2.36
CUX2O14529 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.31□□□□□ -2.36
CUX2O14529 SNORD57-201ENST00000448188 72 ntBASIC0.31□□□□□ -2.36
CUX2O14529 RNU2-11P-201ENST00000459191 187 ntBASIC0.31□□□□□ -2.36
CUX2O14529 RPS29P24-201ENST00000486345 171 ntBASIC0.31□□□□□ -2.36
CUX2O14529 RAC1P9-201ENST00000604990 392 ntBASIC0.31□□□□□ -2.36
CUX2O14529 Z97988.1-201ENST00000637697 135 ntBASIC0.31□□□□□ -2.36
CUX2O14529 MIR302B-201ENST00000362188 73 ntBASIC0.3□□□□□ -2.36
CUX2O14529 Y_RNA.7-201ENST00000362352 102 ntBASIC0.3□□□□□ -2.36
CUX2O14529 Y_RNA.19-201ENST00000362462 99 ntBASIC0.3□□□□□ -2.36
CUX2O14529 RNU6-290P-201ENST00000365212 101 ntBASIC0.3□□□□□ -2.36
CUX2O14529 RNU6-602P-201ENST00000411155 105 ntBASIC0.3□□□□□ -2.36
CUX2O14529 ELOCP20-201ENST00000422460 345 ntBASIC0.3□□□□□ -2.36
CUX2O14529 snoU13.2-201ENST00000459201 104 ntBASIC0.3□□□□□ -2.36
CUX2O14529 RNU7-185P-201ENST00000459215 60 ntBASIC0.3□□□□□ -2.36
CUX2O14529 AC010332.2-201ENST00000613083 1904 ntBASIC0.3□□□□□ -2.36
CUX2O14529 MIR526A2-201ENST00000390198 65 ntBASIC0.29□□□□□ -2.36
CUX2O14529 RNU6-938P-201ENST00000411285 103 ntBASIC0.29□□□□□ -2.36
CUX2O14529 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
CUX2O14529 RNU6-1299P-201ENST00000516316 100 ntBASIC0.29□□□□□ -2.36
CUX2O14529 Y_RNA.757-201ENST00000578934 114 ntBASIC0.29□□□□□ -2.36
CUX2O14529 AC090897.1-201ENST00000580909 226 ntBASIC0.29□□□□□ -2.36
CUX2O14529 Y_RNA.128-201ENST00000363391 112 ntBASIC0.29□□□□□ -2.36
CUX2O14529 RNU4-10P-201ENST00000364383 140 ntBASIC0.29□□□□□ -2.36
CUX2O14529 RNU6-1165P-201ENST00000410119 107 ntBASIC0.29□□□□□ -2.36
CUX2O14529 RNU6-121P-201ENST00000410525 99 ntBASIC0.29□□□□□ -2.36
CUX2O14529 AL731563.1-201ENST00000442202 214 ntBASIC0.29□□□□□ -2.36
CUX2O14529 AL138752.1-201ENST00000452964 351 ntBASIC0.29□□□□□ -2.36
CUX2O14529 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.29□□□□□ -2.36
CUX2O14529 RNU7-102P-201ENST00000458948 62 ntBASIC0.29□□□□□ -2.36
CUX2O14529 RNU6-1270P-201ENST00000517128 108 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms