Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.81□□□□□ -2.28
RTCAO00442 RNU6-561P-201ENST00000516222 102 ntBASIC0.81□□□□□ -2.28
RTCAO00442 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
RTCAO00442 MIR4308-201ENST00000580634 81 ntBASIC0.81□□□□□ -2.28
RTCAO00442 MIR5197-201ENST00000583721 112 ntBASIC0.81□□□□□ -2.28
RTCAO00442 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
RTCAO00442 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
RTCAO00442 Y_RNA.164-201ENST00000363709 102 ntBASIC0.8□□□□□ -2.28
RTCAO00442 RNU6-978P-201ENST00000364371 103 ntBASIC0.8□□□□□ -2.28
RTCAO00442 RNU6-654P-201ENST00000364373 107 ntBASIC0.8□□□□□ -2.28
RTCAO00442 Y_RNA.307-201ENST00000365022 117 ntBASIC0.8□□□□□ -2.28
RTCAO00442 Y_RNA.477-201ENST00000384352 108 ntBASIC0.8□□□□□ -2.28
RTCAO00442 Y_RNA.571-201ENST00000384753 98 ntBASIC0.8□□□□□ -2.28
RTCAO00442 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
RTCAO00442 RNU7-67P-201ENST00000459003 62 ntBASIC0.8□□□□□ -2.28
RTCAO00442 U7.7-201ENST00000459276 60 ntBASIC0.8□□□□□ -2.28
RTCAO00442 RNU6-1110P-201ENST00000516462 101 ntBASIC0.8□□□□□ -2.28
RTCAO00442 RNU6-111P-201ENST00000517179 105 ntBASIC0.8□□□□□ -2.28
RTCAO00442 AC025627.3-201ENST00000582078 182 ntBASIC0.8□□□□□ -2.28
RTCAO00442 AC009779.6-201ENST00000603972 165 ntBASIC0.8□□□□□ -2.28
RTCAO00442 Y_RNA.4-201ENST00000362333 112 ntBASIC0.79□□□□□ -2.28
RTCAO00442 Y_RNA.65-201ENST00000362846 100 ntBASIC0.79□□□□□ -2.28
RTCAO00442 Y_RNA.75-201ENST00000362927 97 ntBASIC0.79□□□□□ -2.28
RTCAO00442 RNU6-275P-201ENST00000364910 107 ntBASIC0.79□□□□□ -2.28
RTCAO00442 Y_RNA.308-201ENST00000365043 101 ntBASIC0.79□□□□□ -2.28
RTCAO00442 SNORA1-201ENST00000384107 130 ntBASIC0.79□□□□□ -2.28
RTCAO00442 RNU6-125P-201ENST00000384505 107 ntBASIC0.79□□□□□ -2.28
RTCAO00442 AL035398.1-201ENST00000430869 322 ntBASIC0.79□□□□□ -2.28
RTCAO00442 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
RTCAO00442 MIR378D2-201ENST00000580636 98 ntBASIC0.79□□□□□ -2.28
RTCAO00442 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
RTCAO00442 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
RTCAO00442 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
RTCAO00442 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
RTCAO00442 RNU6-913P-201ENST00000390913 95 ntBASIC0.78□□□□□ -2.28
RTCAO00442 Y_RNA.618-201ENST00000410949 107 ntBASIC0.78□□□□□ -2.28
RTCAO00442 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
RTCAO00442 RNY3P16-201ENST00000516338 101 ntBASIC0.78□□□□□ -2.28
RTCAO00442 SNORD116-25-201ENST00000516517 92 ntBASIC0.78□□□□□ -2.28
RTCAO00442 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.78□□□□□ -2.28
RTCAO00442 AC023827.1-201ENST00000569247 97 ntBASIC0.78□□□□□ -2.28
RTCAO00442 Z83818.1-201ENST00000603584 150 ntBASIC0.78□□□□□ -2.28
RTCAO00442 AP000753.3-201ENST00000604083 169 ntBASIC0.78□□□□□ -2.28
RTCAO00442 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RTCAO00442 RNU1-93P-201ENST00000364704 169 ntBASIC0.77□□□□□ -2.29
RTCAO00442 Y_RNA.489-201ENST00000384410 101 ntBASIC0.77□□□□□ -2.29
RTCAO00442 RNU6-918P-201ENST00000391219 106 ntBASIC0.77□□□□□ -2.29
RTCAO00442 MIR1827-201ENST00000408549 66 ntBASIC0.77□□□□□ -2.29
RTCAO00442 AC244023.1-201ENST00000426884 112 ntBASIC0.77□□□□□ -2.29
RTCAO00442 AL121914.1-201ENST00000450188 156 ntBASIC0.77□□□□□ -2.29
RTCAO00442 AC113410.1-201ENST00000505029 247 ntBASIC0.77□□□□□ -2.29
RTCAO00442 Y_RNA.797-201ENST00000515977 94 ntBASIC0.77□□□□□ -2.29
RTCAO00442 RNU6-958P-201ENST00000516995 106 ntBASIC0.77□□□□□ -2.29
RTCAO00442 AC242498.1-201ENST00000604134 111 ntBASIC0.77□□□□□ -2.29
RTCAO00442 RNU2-4P-201ENST00000606190 192 ntBASIC0.77□□□□□ -2.29
RTCAO00442 MIR376A2-201ENST00000636782 80 ntBASIC0.77□□□□□ -2.29
RTCAO00442 MIR411-201ENST00000362239 96 ntBASIC0.76□□□□□ -2.29
RTCAO00442 Y_RNA.200-201ENST00000364018 102 ntBASIC0.76□□□□□ -2.29
RTCAO00442 RNU6-643P-201ENST00000384018 107 ntBASIC0.76□□□□□ -2.29
RTCAO00442 Y_RNA.454-201ENST00000384224 113 ntBASIC0.76□□□□□ -2.29
RTCAO00442 RNU6-493P-201ENST00000391321 108 ntBASIC0.76□□□□□ -2.29
RTCAO00442 MIR548I3-201ENST00000408378 149 ntBASIC0.76□□□□□ -2.29
RTCAO00442 MIR1276-201ENST00000408707 83 ntBASIC0.76□□□□□ -2.29
RTCAO00442 AC090844.1-201ENST00000422019 156 ntBASIC0.76□□□□□ -2.29
RTCAO00442 RNU7-80P-201ENST00000459562 61 ntBASIC0.76□□□□□ -2.29
RTCAO00442 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.76□□□□□ -2.29
RTCAO00442 MRPS18CP4-201ENST00000535821 231 ntBASIC0.76□□□□□ -2.29
RTCAO00442 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
RTCAO00442 AL136317.1-201ENST00000612653 226 ntBASIC0.76□□□□□ -2.29
RTCAO00442 MIR8070-201ENST00000616510 88 ntBASIC0.76□□□□□ -2.29
RTCAO00442 RNU6-597P-201ENST00000365620 102 ntBASIC0.75□□□□□ -2.29
RTCAO00442 RNU6-574P-201ENST00000384265 107 ntBASIC0.75□□□□□ -2.29
RTCAO00442 RNU4-70P-201ENST00000384579 139 ntBASIC0.75□□□□□ -2.29
RTCAO00442 SNORD38B-201ENST00000384690 67 ntBASIC0.75□□□□□ -2.29
RTCAO00442 MIR624-201ENST00000385217 97 ntBASIC0.75□□□□□ -2.29
RTCAO00442 RNA5SP261-201ENST00000410536 106 ntBASIC0.75□□□□□ -2.29
RTCAO00442 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.75□□□□□ -2.29
RTCAO00442 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
RTCAO00442 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.75□□□□□ -2.29
RTCAO00442 SNORD38B-202ENST00000625943 69 ntBASIC0.75□□□□□ -2.29
RTCAO00442 Y_RNA.83-201ENST00000363005 113 ntBASIC0.74□□□□□ -2.29
RTCAO00442 RNU6-923P-201ENST00000364753 107 ntBASIC0.74□□□□□ -2.29
RTCAO00442 SNORA25.9-201ENST00000365087 128 ntBASIC0.74□□□□□ -2.29
RTCAO00442 SNORD114-22-201ENST00000365423 72 ntBASIC0.74□□□□□ -2.29
RTCAO00442 Y_RNA.401-201ENST00000383965 117 ntBASIC0.74□□□□□ -2.29
RTCAO00442 Y_RNA.430-201ENST00000384081 110 ntBASIC0.74□□□□□ -2.29
RTCAO00442 SNORA2B-201ENST00000384583 137 ntBASIC0.74□□□□□ -2.29
RTCAO00442 SNORD89-201ENST00000390981 114 ntBASIC0.74□□□□□ -2.29
RTCAO00442 SNORA26.6-201ENST00000391256 115 ntBASIC0.74□□□□□ -2.29
RTCAO00442 AC067940.1-201ENST00000458411 300 ntBASIC0.74□□□□□ -2.29
RTCAO00442 RNU2-11P-201ENST00000459191 187 ntBASIC0.74□□□□□ -2.29
RTCAO00442 COX6CP6-201ENST00000490840 228 ntBASIC0.74□□□□□ -2.29
RTCAO00442 MIR3129-201ENST00000581095 76 ntBASIC0.74□□□□□ -2.29
RTCAO00442 RNU6-94P-201ENST00000607728 107 ntBASIC0.74□□□□□ -2.29
RTCAO00442 AC141273.2-201ENST00000618989 130 ntBASIC0.74□□□□□ -2.29
RTCAO00442 Y_RNA.182-201ENST00000363880 111 ntBASIC0.73□□□□□ -2.29
RTCAO00442 SNORA1.1-201ENST00000364671 133 ntBASIC0.73□□□□□ -2.29
RTCAO00442 Y_RNA.412-201ENST00000384001 104 ntBASIC0.73□□□□□ -2.29
RTCAO00442 MIR520E-201ENST00000384867 87 ntBASIC0.73□□□□□ -2.29
RTCAO00442 MIR563-201ENST00000385080 79 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms