Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 Y_RNA.229-201ENST00000364347 113 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
DDX39AO00148 Y_RNA.572-201ENST00000384757 98 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 MIR563-201ENST00000385080 79 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-1319P-201ENST00000390855 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-747P-201ENST00000390928 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-241P-201ENST00000391148 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-447P-201ENST00000410293 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-1118P-201ENST00000410382 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-1076P-201ENST00000410397 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-355P-201ENST00000410427 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-791P-201ENST00000410467 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-705P-201ENST00000410601 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-1100P-201ENST00000410691 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-860P-201ENST00000410860 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNA5SP127-201ENST00000411051 133 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-1217P-201ENST00000411276 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-785P-201ENST00000411324 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 AF228730.3-201ENST00000436691 102 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 MTATP6P23-201ENST00000440153 476 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 AL138752.1-201ENST00000452964 351 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU7-96P-201ENST00000459535 64 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 RNU6-504P-201ENST00000516568 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 AP003733.2-201ENST00000529409 171 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 U6.90-201ENST00000614007 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 U6.70-201ENST00000620287 104 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 AL160413.1-201ENST00000622780 310 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 UBE2WP1-201ENST00000362030 340 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 Y_RNA.66-201ENST00000362862 102 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 Y_RNA.210-201ENST00000364161 110 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 Y_RNA.258-201ENST00000364613 105 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 RNA5SP517-201ENST00000364724 117 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 Y_RNA.455-201ENST00000384230 98 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 SNORD77.3-201ENST00000391113 65 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 MIR548I3-201ENST00000408378 149 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 RNU2-11P-201ENST00000459191 187 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 RNU6-998P-201ENST00000515894 101 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 AC022523.2-201ENST00000561045 150 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 SNORD92-201ENST00000585078 85 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 AC023932.2-201ENST00000603176 175 ntBASIC0.24□□□□□ -2.37
DDX39AO00148 SNORA8.3-201ENST00000384679 139 ntBASIC0.23□□□□□ -2.37
DDX39AO00148 SNORD12C-201ENST00000386307 89 ntBASIC0.23□□□□□ -2.37
DDX39AO00148 RNA5SP94-201ENST00000516917 108 ntBASIC0.23□□□□□ -2.37
DDX39AO00148 RNU7-156P-201ENST00000517214 74 ntBASIC0.23□□□□□ -2.37
DDX39AO00148 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
DDX39AO00148 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 MIR30D-201ENST00000362283 70 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.7-201ENST00000362352 102 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 RNU6-349P-201ENST00000362402 107 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.64-201ENST00000362845 102 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.91-201ENST00000363042 107 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.115-201ENST00000363272 98 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.128-201ENST00000363391 112 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 RNA5SP325-201ENST00000363756 130 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 SNORA22B-201ENST00000383876 138 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.410-201ENST00000383992 113 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 RNU6-211P-201ENST00000384047 107 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.440-201ENST00000384120 114 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.527-201ENST00000384573 102 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 MIR626-201ENST00000385032 94 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 MT-TF-201ENST00000387314 71 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.22□□□□□ -2.37
DDX39AO00148 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.22□□□□□ -2.37
DDX39AO00148 SERF1AP1-201ENST00000514575 187 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 RNU6-1143P-201ENST00000516125 104 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 RNU6-1299P-201ENST00000516316 100 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 RNA5SP330-201ENST00000517096 96 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 AC113195.1-201ENST00000579952 141 ntBASIC0.22□□□□□ -2.37
DDX39AO00148 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.22□□□□□ -2.37
DDX39AO00148 Y_RNA.84-201ENST00000363011 104 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 Y_RNA.158-201ENST00000363651 101 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 Y_RNA.634-201ENST00000364811 113 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 RNU6-1189P-201ENST00000383958 107 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 RNU6-484P-201ENST00000384016 107 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 Y_RNA.460-201ENST00000384255 102 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 RNU6-1289P-201ENST00000384431 106 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 SNORA26-201ENST00000391286 122 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 MIR1197-201ENST00000408818 88 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 RNU2-55P-201ENST00000411146 174 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 Y_RNA.711-201ENST00000516993 102 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.21□□□□□ -2.38
DDX39AO00148 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.21□□□□□ -2.38
DDX39AO00148 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.21□□□□□ -2.38
DDX39AO00148 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 AC134503.1-201ENST00000633048 54 ntBASIC0.21□□□□□ -2.38
DDX39AO00148 MIR342-201ENST00000362212 99 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 MTND5P22-201ENST00000458380 195 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.2□□□□□ -2.38
DDX39AO00148 RNU6-1338P-201ENST00000516328 91 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 RNA5SP153-201ENST00000516498 76 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 AP003327.1-201ENST00000529684 127 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms