Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNU6-453P-201ENST00000516819 85 ntBASIC0.51□□□□□ -2.33
NPIPA2E9PIF3 MIR6740-201ENST00000618268 113 ntBASIC0.51□□□□□ -2.33
NPIPA2E9PIF3 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
NPIPA2E9PIF3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 Y_RNA.66-201ENST00000362862 102 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 snoU2_19.4-201ENST00000364329 80 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 RNU6-1227P-201ENST00000383981 107 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 RNU6-1228P-201ENST00000391014 107 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 RNU6-126P-201ENST00000516685 103 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 MIR4676-201ENST00000583078 72 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 Z83818.1-201ENST00000603584 150 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 AC010332.2-201ENST00000613083 1904 ntBASIC0.5□□□□□ -2.33
NPIPA2E9PIF3 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 Y_RNA.199-201ENST00000364014 102 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 SNORA1.1-201ENST00000364671 133 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 AL606845.1-201ENST00000404881 255 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 RNU2-11P-201ENST00000459191 187 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 Y_RNA.679-201ENST00000516416 91 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 MIR4711-201ENST00000578274 70 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 MIR4804-201ENST00000581683 73 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 Z97988.1-201ENST00000637697 135 ntBASIC0.49□□□□□ -2.33
NPIPA2E9PIF3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 Y_RNA.304-201ENST00000365011 112 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 RNU6-484P-201ENST00000384016 107 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 MIR588-201ENST00000384900 83 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 MIR573-201ENST00000384964 99 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 SNORA26-201ENST00000391286 122 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 Y_RNA.590-201ENST00000410140 107 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 RNU6-602P-201ENST00000411155 105 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
NPIPA2E9PIF3 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
NPIPA2E9PIF3 SNORD12C-201ENST00000386307 89 ntBASIC0.47□□□□□ -2.33
NPIPA2E9PIF3 RNU2-55P-201ENST00000411146 174 ntBASIC0.47□□□□□ -2.33
NPIPA2E9PIF3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.47□□□□□ -2.33
NPIPA2E9PIF3 AL442663.2-201ENST00000554385 511 ntBASIC0.47□□□□□ -2.33
NPIPA2E9PIF3 U2.14-201ENST00000615943 113 ntBASIC0.47□□□□□ -2.33
NPIPA2E9PIF3 AL365265.1-201ENST00000621045 234 ntBASIC0.47□□□□□ -2.33
NPIPA2E9PIF3 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.416-201ENST00000384014 113 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 SNORA1-201ENST00000384107 130 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.483-201ENST00000384380 101 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 MT-TW-201ENST00000387382 68 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 SNORD77.3-201ENST00000391113 65 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 MIR548I3-201ENST00000408378 149 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 MIR1302-6-201ENST00000408466 90 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 RNU7-56P-201ENST00000458744 62 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 SNORD2.1-201ENST00000458762 69 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 RNU7-45P-201ENST00000459460 63 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 RNU7-96P-201ENST00000459535 64 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 RNU6-998P-201ENST00000515894 101 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 AP003072.1-201ENST00000531740 145 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 MIR3612-201ENST00000579753 87 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 AL162730.1-201ENST00000605734 292 ntBASIC0.46□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.82-201ENST00000363000 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.92-201ENST00000363043 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.235-201ENST00000364412 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 SNORA63C-201ENST00000364578 129 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.306-201ENST00000365015 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.312-201ENST00000365089 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.322-201ENST00000365151 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 RNY3P5-201ENST00000384127 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 MIR616-201ENST00000385293 97 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.650-201ENST00000459002 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 snoU13.2-201ENST00000459201 104 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 RNU6-561P-201ENST00000516222 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 RNA5SP153-201ENST00000516498 76 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.777-201ENST00000516982 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.771-201ENST00000598668 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.789-201ENST00000622480 102 ntBASIC0.45□□□□□ -2.34
NPIPA2E9PIF3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
NPIPA2E9PIF3 MIR302B-201ENST00000362188 73 ntBASIC0.44□□□□□ -2.34
NPIPA2E9PIF3 MIR18A-201ENST00000362310 71 ntBASIC0.44□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.11-201ENST00000362375 109 ntBASIC0.44□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.23-201ENST00000362496 106 ntBASIC0.44□□□□□ -2.34
NPIPA2E9PIF3 RNA5SP325-201ENST00000363756 130 ntBASIC0.44□□□□□ -2.34
NPIPA2E9PIF3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 369.5 ms