Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 RNU6-998P-201ENST00000515894 101 ntBASIC0.3□□□□□ -2.36
RNF222A6NCQ9 SNORA25.12-201ENST00000516202 82 ntBASIC0.3□□□□□ -2.36
RNF222A6NCQ9 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
RNF222A6NCQ9 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
RNF222A6NCQ9 RNU7-156P-201ENST00000517214 74 ntBASIC0.3□□□□□ -2.36
RNF222A6NCQ9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.3□□□□□ -2.36
RNF222A6NCQ9 AC113195.1-201ENST00000579952 141 ntBASIC0.3□□□□□ -2.36
RNF222A6NCQ9 RNU4-10P-201ENST00000364383 140 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 SNORA22B-201ENST00000383876 138 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 MIR216A-201ENST00000385063 110 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 MIR548P-201ENST00000408336 84 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 SNORD100-201ENST00000408573 76 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 RNU7-102P-201ENST00000458948 62 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 RNA5SP153-201ENST00000516498 76 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 MIR4711-201ENST00000578274 70 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 AC243829.3-201ENST00000622177 108 ntBASIC0.29□□□□□ -2.36
RNF222A6NCQ9 Y_RNA.118-201ENST00000363300 101 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
RNF222A6NCQ9 Y_RNA.527-201ENST00000384573 102 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 MIR489-201ENST00000384923 84 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 RNA5SP193-201ENST00000410353 107 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 SNORA40.8-201ENST00000411034 126 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 AL138752.1-201ENST00000452964 351 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 AL117351.2-201ENST00000513571 157 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 Y_RNA.711-201ENST00000516993 102 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 SNORD92-201ENST00000585078 85 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 uc_338.6-201ENST00000613544 171 ntBASIC0.28□□□□□ -2.36
RNF222A6NCQ9 MIR342-201ENST00000362212 99 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.275-201ENST00000364726 110 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 RNU6-1289P-201ENST00000384431 106 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 MIR626-201ENST00000385032 94 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 AF228730.3-201ENST00000436691 102 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 RNU6-1338P-201ENST00000516328 91 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.27□□□□□ -2.37
RNF222A6NCQ9 AC243829.6-201ENST00000612652 106 ntBASIC0.27□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.16-201ENST00000362421 102 ntBASIC0.26□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.66-201ENST00000362862 102 ntBASIC0.26□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.84-201ENST00000363011 104 ntBASIC0.26□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.26□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.26□□□□□ -2.37
RNF222A6NCQ9 SCARNA24.2-201ENST00000516968 130 ntBASIC0.26□□□□□ -2.37
RNF222A6NCQ9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.26□□□□□ -2.37
RNF222A6NCQ9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.26□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.64-201ENST00000362845 102 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 SNORD114-23-201ENST00000363536 72 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.199-201ENST00000364014 102 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 RNU6-806P-201ENST00000365147 105 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.454-201ENST00000384224 113 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 MIR518A1-201ENST00000385068 85 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 MIR563-201ENST00000385080 79 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.25□□□□□ -2.37
RNF222A6NCQ9 RNU7-80P-201ENST00000459562 61 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 RNU6-448P-201ENST00000517052 107 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 AC022523.2-201ENST00000561045 150 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 AC010487.4-201ENST00000637027 61 ntBASIC0.25□□□□□ -2.37
RNF222A6NCQ9 MTND4P29-201ENST00000503122 1372 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.44-201ENST00000362676 108 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 SNORD12C-201ENST00000386307 89 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 SNORA79-201ENST00000408376 140 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 RNA5SP237-201ENST00000410414 113 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.24□□□□□ -2.37
RNF222A6NCQ9 RNU6-469P-201ENST00000516253 101 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 RNA5SP94-201ENST00000516917 108 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 MIR4680-201ENST00000580906 66 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 AC008608.1-201ENST00000603910 127 ntBASIC0.24□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.202-201ENST00000364083 110 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.351-201ENST00000365436 96 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 RNU6-484P-201ENST00000384016 107 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 SNORD93-201ENST00000408813 74 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 MIR3152-201ENST00000579801 74 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 RN7SL793P-201ENST00000583259 296 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 AC097639.2-201ENST00000603159 172 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.23□□□□□ -2.37
RNF222A6NCQ9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.23□□□□□ -2.37
RNF222A6NCQ9 MIR30D-201ENST00000362283 70 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 RNU6-653P-201ENST00000363074 106 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.393-201ENST00000383936 102 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.535-201ENST00000384612 99 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 Y_RNA.572-201ENST00000384757 98 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 RNU6-713P-201ENST00000384761 107 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 RNU6-1228P-201ENST00000391014 107 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 RNU6-1203P-201ENST00000410703 110 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 MIR6717-201ENST00000622747 73 ntBASIC0.22□□□□□ -2.37
RNF222A6NCQ9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
RNF222A6NCQ9 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
RNF222A6NCQ9 Y_RNA.26-201ENST00000362539 101 ntBASIC0.21□□□□□ -2.38
RNF222A6NCQ9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 424.5 ms