Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 SNORD24-201ENST00000383884 75 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6-144P-201ENST00000383951 107 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6-35P-201ENST00000384530 107 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 MIR548I3-201ENST00000408378 149 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 SNORD93-201ENST00000408813 74 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU4-30P-201ENST00000410245 143 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6-998P-201ENST00000515894 101 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6-718P-201ENST00000516166 105 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU7-110P-201ENST00000516891 62 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6-765P-201ENST00000516916 99 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 IGLVI-20-201ENST00000519296 130 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 MIR5690-201ENST00000583739 73 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 MIR6082-201ENST00000613604 109 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6-845P-201ENST00000362578 103 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 RNU6-899P-201ENST00000363947 107 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 SNORD77.3-201ENST00000391113 65 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 POLR2KP2-201ENST00000438155 177 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 RNU7-96P-201ENST00000459535 64 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 RNU6-191P-201ENST00000516295 94 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 RNU6-504P-201ENST00000516568 104 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 MIR3152-201ENST00000579801 74 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 MIR4639-201ENST00000584938 69 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 AC122108.2-201ENST00000611946 526 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 AL662814.1-201ENST00000617364 121 ntBASIC-0.23□□□□□ -2.45
USH1CQ9Y6N9 RNU6-888P-201ENST00000363010 101 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 SNORD61-201ENST00000384252 73 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU6-937P-201ENST00000384325 106 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU6-291P-201ENST00000384720 107 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 U8.15-201ENST00000390947 134 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 MIR1912-201ENST00000410389 80 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU6-383P-201ENST00000410864 94 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 AC016907.1-201ENST00000419483 435 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU7-165P-201ENST00000458864 60 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU2-11P-201ENST00000459191 187 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RPL39P34-201ENST00000477141 156 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU7-129P-201ENST00000516128 62 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU6-699P-201ENST00000517081 110 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 MIR5589-201ENST00000579442 60 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 AL049861.1-201ENST00000603130 150 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 AL121655.1-201ENST00000605811 308 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 MIR6717-201ENST00000622747 73 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 MIR1295B-201ENST00000636144 60 ntBASIC-0.24□□□□□ -2.45
USH1CQ9Y6N9 RNU6-623P-201ENST00000363143 105 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 SNORD114-31-201ENST00000363219 75 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 RNU6-514P-201ENST00000384208 107 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 RNU6-763P-201ENST00000390865 106 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 RNU6-269P-201ENST00000391077 97 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 MIR892B-201ENST00000401279 77 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 AL589823.1-201ENST00000429577 183 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 AL138752.1-201ENST00000452964 351 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 RNU6-693P-201ENST00000516134 107 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 MIR4662B-201ENST00000579498 81 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 MIR4752-201ENST00000579672 72 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 MIR4491-201ENST00000581087 68 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 AC092447.9-201ENST00000603395 144 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 MIR499B-201ENST00000636498 73 ntBASIC-0.25□□□□□ -2.45
USH1CQ9Y6N9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 RNU6-597P-201ENST00000365620 102 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 AC023449.1-201ENST00000454464 154 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 RNU6-764P-201ENST00000516396 105 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 AC084782.3-201ENST00000612282 578 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 AC013791.1-201ENST00000616619 62 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 AC244669.1-204ENST00000621564 178 ntBASIC-0.26□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.27□□□□□ -2.45
USH1CQ9Y6N9 RNU6-653P-201ENST00000363074 106 ntBASIC-0.27□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.27□□□□□ -2.45
USH1CQ9Y6N9 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.27□□□□□ -2.45
USH1CQ9Y6N9 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.27□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.27□□□□□ -2.45
USH1CQ9Y6N9 SNORD81.2-201ENST00000365153 76 ntBASIC-0.27□□□□□ -2.45
USH1CQ9Y6N9 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms