Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 Y_RNA.527-201ENST00000384573 102 ntBASIC0.54□□□□□ -2.32
USP16Q9Y5T5 Y_RNA.641-201ENST00000459414 105 ntBASIC0.54□□□□□ -2.32
USP16Q9Y5T5 SERF1AP1-201ENST00000514575 187 ntBASIC0.54□□□□□ -2.32
USP16Q9Y5T5 MIR4680-201ENST00000580906 66 ntBASIC0.54□□□□□ -2.32
USP16Q9Y5T5 MIR3171-201ENST00000584270 74 ntBASIC0.54□□□□□ -2.32
USP16Q9Y5T5 MIR8087-201ENST00000612745 78 ntBASIC0.54□□□□□ -2.32
USP16Q9Y5T5 AC134878.1-201ENST00000619901 243 ntBASIC0.54□□□□□ -2.32
USP16Q9Y5T5 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
USP16Q9Y5T5 RNA5SP95-201ENST00000410319 137 ntBASIC0.53□□□□□ -2.32
USP16Q9Y5T5 MTCO2P24-201ENST00000515611 426 ntBASIC0.53□□□□□ -2.32
USP16Q9Y5T5 RNU6-365P-201ENST00000517113 106 ntBASIC0.53□□□□□ -2.32
USP16Q9Y5T5 AP000942.4-201ENST00000604811 241 ntBASIC0.53□□□□□ -2.32
USP16Q9Y5T5 RNU6-797P-201ENST00000363101 109 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 RNU6-580P-201ENST00000365159 107 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 RNU4-45P-201ENST00000365469 141 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 RNU6-716P-201ENST00000365621 103 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 RNU6-639P-201ENST00000384074 107 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 SNORA40.5-201ENST00000391061 128 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 RPL21P38-201ENST00000418090 167 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 RNU7-73P-201ENST00000458743 63 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.666-201ENST00000516187 112 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 Z83818.1-201ENST00000603584 150 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 U6.104-201ENST00000637979 90 ntBASIC0.52□□□□□ -2.33
USP16Q9Y5T5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.52□□□□□ -2.33
USP16Q9Y5T5 MIR330-201ENST00000362196 94 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.138-201ENST00000363462 102 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 RNU6-713P-201ENST00000384761 107 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 RNA5SP127-201ENST00000411051 133 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 RNU2-55P-201ENST00000411146 174 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 RNU6-504P-201ENST00000516568 104 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 AL008718.3-201ENST00000610217 321 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 snoU18.1-201ENST00000629629 71 ntBASIC0.51□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.84-201ENST00000363011 104 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 RNY3P5-201ENST00000384127 102 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 MIR215-201ENST00000384858 110 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 RNU6-205P-201ENST00000390858 107 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 RPS29P24-201ENST00000486345 171 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.5□□□□□ -2.33
USP16Q9Y5T5 RNU6-693P-201ENST00000516134 107 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 AC100767.1-201ENST00000528178 123 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 AC044792.1-201ENST00000593294 196 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 AL356055.1-201ENST00000602528 446 ntBASIC0.5□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.37-201ENST00000362606 108 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-888P-201ENST00000363010 101 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.275-201ENST00000364726 110 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-934P-201ENST00000365154 107 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 SNORA27-201ENST00000384323 126 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.486-201ENST00000384398 107 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-125P-201ENST00000384505 107 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 SNORD38B-201ENST00000384690 67 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-1203P-201ENST00000410703 110 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 AC244098.3-201ENST00000424803 96 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU7-62P-201ENST00000458856 62 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-1299P-201ENST00000516316 100 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-1338P-201ENST00000516328 91 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 RNU6-977P-201ENST00000516411 103 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.49□□□□□ -2.33
USP16Q9Y5T5 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 AC020661.2-201ENST00000560114 134 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 AL109933.3-201ENST00000619095 188 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 SNORD38B-202ENST00000625943 69 ntBASIC0.49□□□□□ -2.33
USP16Q9Y5T5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
USP16Q9Y5T5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.44-201ENST00000362676 108 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 RNU6-211P-201ENST00000384047 107 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 RNU6-1289P-201ENST00000384431 106 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 MIR1197-201ENST00000408818 88 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 RNU6-985P-201ENST00000410182 104 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 RNA5SP222-201ENST00000411039 105 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 RNU7-96P-201ENST00000459535 64 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 SNORA18.4-201ENST00000516440 124 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 RNU6-958P-201ENST00000516995 106 ntBASIC0.48□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.16-201ENST00000362421 102 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.64-201ENST00000362845 102 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.153-201ENST00000363615 91 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 SNORD45.3-201ENST00000363836 72 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.229-201ENST00000364347 113 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 SNORA1.1-201ENST00000364671 133 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 SNORA33.2-201ENST00000365413 134 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.410-201ENST00000383992 113 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.432-201ENST00000384087 111 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 MIR520F-201ENST00000384824 87 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 MIR573-201ENST00000384964 99 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 MIR518F-201ENST00000384973 87 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 AC007751.1-201ENST00000529260 376 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 MIR4771-2-201ENST00000577758 74 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 MIR4771-1-201ENST00000582617 74 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.47□□□□□ -2.33
USP16Q9Y5T5 Z97988.1-201ENST00000637697 135 ntBASIC0.47□□□□□ -2.33
USP16Q9Y5T5 Y_RNA.24-201ENST00000362508 103 ntBASIC0.46□□□□□ -2.34
USP16Q9Y5T5 RNU6-806P-201ENST00000365147 105 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms