Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-938P-201ENST00000411285 103 ntBASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.644-201ENST00000459006 113 ntBASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU7-90P-201ENST00000459216 62 ntBASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 RPS29P24-201ENST00000486345 171 ntBASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.674-201ENST00000516362 113 ntBASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORA18.4-201ENST00000516440 124 ntBASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 MTND1P7-201ENST00000632801 297 ntBASIC1.55□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.274-201ENST00000364714 101 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-200P-201ENST00000364743 107 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.793-201ENST00000411222 111 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 MRPL35P3-201ENST00000421557 364 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU7-21P-201ENST00000459430 62 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU7-96P-201ENST00000459535 64 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORD36C-201ENST00000516733 66 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.700-201ENST00000516806 100 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 AL365205.2-201ENST00000594586 68 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 AC072026.1-201ENST00000605023 201 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 SEPT14P17-201ENST00000617978 177 ntBASIC1.54□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-939P-201ENST00000384634 107 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORA75.2-201ENST00000391138 150 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORA75.3-201ENST00000391231 150 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 MIR1185-1-201ENST00000408598 86 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-321P-201ENST00000410912 106 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 MIR2115-201ENST00000516657 100 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 U6.106-201ENST00000636360 105 ntBASIC1.53□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.233-201ENST00000364407 101 ntBASIC1.52□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.257-201ENST00000364596 102 ntBASIC1.52□□□□□ -2.17
COL4A3BPQ9Y5P4 RNA5SP404-201ENST00000517118 132 ntBASIC1.52□□□□□ -2.17
COL4A3BPQ9Y5P4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6-312P-201ENST00000364629 107 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6-396P-201ENST00000365369 105 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6-47P-201ENST00000383866 107 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 SNORA1-201ENST00000384107 130 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR19B1-201ENST00000384829 87 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 AC005840.1-201ENST00000498412 377 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR4431-201ENST00000579990 94 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR3129-201ENST00000581095 76 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 AC008163.1-202ENST00000636004 2889 ntBASIC1.51□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU1-124P-201ENST00000363861 145 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 SNORD77.3-201ENST00000391113 65 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 AC002429.1-201ENST00000437672 148 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 AL392103.1-201ENST00000447000 198 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU7-73P-201ENST00000458743 63 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 TRMT112P2-201ENST00000512910 132 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6-958P-201ENST00000516995 106 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 AP002392.1-201ENST00000537692 208 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR5197-201ENST00000583721 112 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 AL157834.3-201ENST00000615543 103 ntBASIC1.5□□□□□ -2.17
COL4A3BPQ9Y5P4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6-978P-201ENST00000364371 103 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 SNORA25.7-201ENST00000364375 127 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 AC006461.1-201ENST00000412637 326 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 AL035398.1-201ENST00000430869 322 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR548AO-201ENST00000579992 96 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 AL353770.2-201ENST00000620024 78 ntBASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A3BPQ9Y5P4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.521-201ENST00000384560 114 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU7-80P-201ENST00000459562 61 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 AC107027.2-201ENST00000512197 115 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6-998P-201ENST00000515894 101 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6-138P-201ENST00000515952 107 ntBASIC1.48□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.29-201ENST00000362570 113 ntBASIC1.47□□□□□ -2.17
COL4A3BPQ9Y5P4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.47□□□□□ -2.17
COL4A3BPQ9Y5P4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.47□□□□□ -2.17
COL4A3BPQ9Y5P4 RNA5SP127-201ENST00000411051 133 ntBASIC1.47□□□□□ -2.17
COL4A3BPQ9Y5P4 MIR302B-201ENST00000362188 73 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR200A-201ENST00000384875 90 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR1302-7-201ENST00000408841 72 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 RNU6-613P-201ENST00000410412 108 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 AC004223.1-201ENST00000479840 271 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 RPS23P4-201ENST00000487908 423 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR4781-201ENST00000585250 76 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 AP000753.3-201ENST00000604083 169 ntBASIC1.46□□□□□ -2.18
COL4A3BPQ9Y5P4 RNY1P10-201ENST00000363268 113 ntBASIC1.45□□□□□ -2.18
COL4A3BPQ9Y5P4 MT-TN-201ENST00000387400 73 ntBASIC1.45□□□□□ -2.18
COL4A3BPQ9Y5P4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms