Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 AL603914.1-201ENST00000401964 204 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 MIR1287-201ENST00000408492 90 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 SNORD13-201ENST00000459299 104 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 SNORD36C-201ENST00000516733 66 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 SCARNA15-202ENST00000516881 127 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 AC090049.2-201ENST00000550377 109 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 snoU13.31-201ENST00000607291 104 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 AC015726.2-201ENST00000620112 122 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 MIR378A-201ENST00000362177 66 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 SNORD115-28-201ENST00000363931 81 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-938P-201ENST00000411285 103 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 AC087499.4-201ENST00000448505 178 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-322P-201ENST00000516010 103 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 SNORD33.1-201ENST00000516213 88 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 MIR6129-201ENST00000616087 109 ntBASIC1.86□□□□□ -2.11
PCDHB1Q9Y5F3 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.85□□□□□ -2.11
PCDHB1Q9Y5F3 AC133485.4-201ENST00000561835 220 ntBASIC1.85□□□□□ -2.11
PCDHB1Q9Y5F3 AC138907.4-201ENST00000570107 226 ntBASIC1.85□□□□□ -2.11
PCDHB1Q9Y5F3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
PCDHB1Q9Y5F3 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
PCDHB1Q9Y5F3 MIR3914-2-201ENST00000637339 95 ntBASIC1.85□□□□□ -2.11
PCDHB1Q9Y5F3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 SNORA1.2-201ENST00000365189 134 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 SNORD58C-201ENST00000365223 64 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 SNORD18B-201ENST00000365659 72 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 MIR516B2-201ENST00000385190 85 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 MIR653-201ENST00000385279 96 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 FAM106DP-201ENST00000586416 501 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 MIR8081-201ENST00000611533 95 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.84□□□□□ -2.11
PCDHB1Q9Y5F3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 MIR526A1-201ENST00000384897 85 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 BTF3P4-201ENST00000418852 495 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 AL035461.1-201ENST00000421490 332 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 MTND5P34-201ENST00000568888 325 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 MIR5197-201ENST00000583721 112 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 AL513534.2-201ENST00000603836 250 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 AC106754.2-201ENST00000623006 233 ntBASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PCDHB1Q9Y5F3 WWP1P1-201ENST00000466609 2769 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 SNORA63.4-201ENST00000362763 126 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 AL627390.1-201ENST00000396055 340 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 HSPE1P24-201ENST00000450782 238 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 RN7SKP19-201ENST00000516016 252 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-476P-201ENST00000384726 107 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 U8.17-201ENST00000391292 132 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 AL451046.2-201ENST00000403074 277 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-321P-201ENST00000410912 106 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 AC107297.1-201ENST00000459991 176 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 RN7SKP179-201ENST00000516126 217 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 MIR8063-201ENST00000621930 81 ntBASIC1.81□□□□□ -2.12
PCDHB1Q9Y5F3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 MIR1263-201ENST00000408324 86 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 AC079140.2-201ENST00000506193 142 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-240P-201ENST00000516098 97 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-919P-201ENST00000516731 104 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 SNORA74.3-201ENST00000517108 154 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 MIR3683-201ENST00000580847 82 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 HSPE1P19-201ENST00000603327 295 ntBASIC1.8□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-647P-201ENST00000364243 107 ntBASIC1.79□□□□□ -2.12
PCDHB1Q9Y5F3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.79□□□□□ -2.12
PCDHB1Q9Y5F3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms