Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 SNORD115-41-201ENST00000363608 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-11-201ENST00000363616 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-5-201ENST00000363633 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-39-201ENST00000363694 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-4-201ENST00000363810 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-16-201ENST00000363887 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-6-201ENST00000363942 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-42-201ENST00000364273 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.237-201ENST00000364439 102 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-15-201ENST00000364809 81 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-1-201ENST00000364961 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-26-201ENST00000365067 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-10-201ENST00000365073 81 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 RNY4P3-201ENST00000365254 95 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-43-201ENST00000365503 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-36-201ENST00000365629 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 RNU6-102P-201ENST00000384485 104 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORA80D-201ENST00000384488 135 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 MIR802-201ENST00000390235 94 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 RNU1-119P-201ENST00000391122 165 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 AC090844.1-201ENST00000422019 156 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.51□□□□□ -2.33
SHANK1Q9Y566 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.51□□□□□ -2.33
SHANK1Q9Y566 RNU6-1045P-201ENST00000516321 107 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 RNU6-830P-201ENST00000516353 107 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 AP000753.3-201ENST00000604083 169 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-40-201ENST00000606510 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SHANK1Q9Y566 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.105-201ENST00000363182 111 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.176-201ENST00000363815 109 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 SNORA27-201ENST00000384323 126 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 MIR1302-6-201ENST00000408466 90 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.621-201ENST00000411065 96 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 AL022718.1-201ENST00000412004 84 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.5□□□□□ -2.33
SHANK1Q9Y566 RNU6-998P-201ENST00000515894 101 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 RNA5SP153-201ENST00000516498 76 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 AL049861.1-201ENST00000603130 150 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.5□□□□□ -2.33
SHANK1Q9Y566 AC015726.2-201ENST00000620112 122 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.363-201ENST00000365529 113 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 MIR570-201ENST00000384917 97 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 SNORA79-201ENST00000408376 140 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.5□□□□□ -2.33
SHANK1Q9Y566 RNU7-96P-201ENST00000459535 64 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 CYCTP-201ENST00000504253 315 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.666-201ENST00000516187 112 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 RNU6-1338P-201ENST00000516328 91 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 DEFB117-201ENST00000602356 141 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.5□□□□□ -2.33
SHANK1Q9Y566 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SHANK1Q9Y566 RNA5SP327-201ENST00000362494 101 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 SNORA25.3-201ENST00000363205 127 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 SNORD115-28-201ENST00000363931 81 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.277-201ENST00000364754 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.292-201ENST00000364904 97 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 SNORD58.1-201ENST00000391313 66 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 MIR942-201ENST00000401111 86 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 RNU7-73P-201ENST00000458743 63 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 SNORA62.5-201ENST00000516634 120 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.82-201ENST00000363000 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.92-201ENST00000363043 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.235-201ENST00000364412 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.306-201ENST00000365015 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.312-201ENST00000365089 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.322-201ENST00000365151 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 RNU6-1189P-201ENST00000383958 107 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 RNU6-514P-201ENST00000384208 107 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 MT-TW-201ENST00000387382 68 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 SNORA40.5-201ENST00000391061 128 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 MIR548O-201ENST00000408583 114 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.650-201ENST00000459002 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 AC098869.1-201ENST00000481627 292 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.777-201ENST00000516982 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.771-201ENST00000598668 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.789-201ENST00000622480 102 ntBASIC0.49□□□□□ -2.33
SHANK1Q9Y566 SNORA1.1-201ENST00000364671 133 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.494-201ENST00000384432 111 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 MIR616-201ENST00000385293 97 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 SNORD12-201ENST00000391002 90 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 RNU6-938P-201ENST00000411285 103 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 RPS3AP1-201ENST00000413190 320 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.48□□□□□ -2.33
SHANK1Q9Y566 AL035398.1-201ENST00000430869 322 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 snoU13.21-201ENST00000459368 105 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 RPS29P24-201ENST00000486345 171 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.700-201ENST00000516806 100 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 RNU6-1270P-201ENST00000517128 108 ntBASIC0.48□□□□□ -2.33
SHANK1Q9Y566 MT-TN-201ENST00000387400 73 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 SNRPGP10-201ENST00000432323 225 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 TRBVB-201ENST00000477100 408 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 MIR3192-201ENST00000584920 77 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 BX284668.6-201ENST00000606899 438 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 MIR409-201ENST00000362237 79 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 401.5 ms