Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SNORD115-29-201ENST00000362834 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-9-201ENST00000362912 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-21-201ENST00000362963 81 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-14-201ENST00000363090 81 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-13-201ENST00000363358 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-41-201ENST00000363608 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-11-201ENST00000363616 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-5-201ENST00000363633 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-39-201ENST00000363694 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-4-201ENST00000363810 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-16-201ENST00000363887 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-6-201ENST00000363942 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-42-201ENST00000364273 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-15-201ENST00000364809 81 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-1-201ENST00000364961 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-26-201ENST00000365067 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-10-201ENST00000365073 81 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-43-201ENST00000365503 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-36-201ENST00000365629 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 AL392103.1-201ENST00000447000 198 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 snoU13.16-201ENST00000459350 104 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 MTCO2P24-201ENST00000515611 426 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 RNU7-25P-201ENST00000516544 62 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-504P-201ENST00000516568 104 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 AC100767.1-201ENST00000528178 123 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 SNORD115-40-201ENST00000606510 82 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 AL008718.3-201ENST00000610217 321 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 AL589743.1-201ENST00000551932 2712 ntBASIC0.7□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.24-201ENST00000362508 103 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 RNY3P5-201ENST00000384127 102 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-35P-201ENST00000384530 107 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.572-201ENST00000384757 98 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 SNORD89-201ENST00000390981 114 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 MIR1197-201ENST00000408818 88 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.590-201ENST00000410140 107 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-613P-201ENST00000410412 108 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 RNU2-55P-201ENST00000411146 174 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-693P-201ENST00000516134 107 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.666-201ENST00000516187 112 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-1299P-201ENST00000516316 100 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.720-201ENST00000517166 92 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 AP003072.1-201ENST00000531740 145 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 MTND1P7-201ENST00000632801 297 ntBASIC0.69□□□□□ -2.3
RPH3AQ9Y2J0 MIR1-1-201ENST00000362147 71 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 MIR335-201ENST00000362173 94 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-238P-201ENST00000363313 106 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.176-201ENST00000363815 109 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.512-201ENST00000384518 102 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 MIR626-201ENST00000385032 94 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 SNORA40.5-201ENST00000391061 128 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 RNU2-70P-201ENST00000410718 179 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 MIR6516-201ENST00000630554 81 ntBASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.68□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.237-201ENST00000364439 102 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 SNORD24-201ENST00000383884 75 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.486-201ENST00000384398 107 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.494-201ENST00000384432 111 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 MT-TN-201ENST00000387400 73 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 RNU7-53P-201ENST00000516705 60 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 MIR548AO-201ENST00000579992 96 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 AC134878.1-201ENST00000619901 243 ntBASIC0.67□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.229-201ENST00000364347 113 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-1160P-201ENST00000384546 104 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 SNORA79-201ENST00000408376 140 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 snoU13.21-201ENST00000459368 105 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 RNU2-13P-201ENST00000515909 113 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 RNU6-958P-201ENST00000516995 106 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.812-201ENST00000610788 101 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.784-201ENST00000613803 101 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 U2.14-201ENST00000615943 113 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.787-201ENST00000616522 101 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.780-201ENST00000617336 101 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.801-201ENST00000619005 101 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 7SK.10-201ENST00000621414 298 ntBASIC0.66□□□□□ -2.3
RPH3AQ9Y2J0 Y_RNA.117-201ENST00000363294 101 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 SNORA63C-201ENST00000364578 129 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-740P-201ENST00000364734 105 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 Y_RNA.461-201ENST00000384263 103 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 RNU6-1011P-201ENST00000384668 107 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 MIR8062-201ENST00000621515 85 ntBASIC0.65□□□□□ -2.31
RPH3AQ9Y2J0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RPH3AQ9Y2J0 MIR377-201ENST00000362145 69 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms