Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 RNU6-679P-201ENST00000391003 106 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 Y_RNA.593-201ENST00000410292 98 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 RNU6-1190P-201ENST00000410811 104 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 AC004941.2-201ENST00000427009 228 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 AC093850.1-201ENST00000454121 251 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 RPS29P29-201ENST00000456396 171 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 AC099513.1-201ENST00000490423 301 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 RPL23AP63-201ENST00000498752 471 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 RNU7-53P-201ENST00000516705 60 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 SUB1P4-201ENST00000566062 339 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 AC012531.4-201ENST00000616509 177 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 MIR1245B-201ENST00000636115 69 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 RNU6-1134P-201ENST00000365156 101 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 RNU6-820P-201ENST00000384273 107 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 RNU6-1152P-201ENST00000384576 107 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 RNU6-296P-201ENST00000384608 107 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 MIR520A-201ENST00000384862 85 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 MIR136-201ENST00000385207 82 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 SNORD28B-201ENST00000390993 75 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 RPL23AP94-201ENST00000512518 302 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 RNU6-795P-201ENST00000516323 103 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 AL590808.1-201ENST00000618696 141 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 AL513423.1-201ENST00000621695 132 ntBASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.52□□□□□ -2.01
AP4E1Q9UPM8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 Y_RNA.377-201ENST00000365644 108 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 Y_RNA.430-201ENST00000384081 110 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 RNU1-138P-201ENST00000384093 164 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 RNU6-616P-201ENST00000384353 107 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 RNU7-34P-201ENST00000459394 64 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 MIR3162-201ENST00000581818 82 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 MIR548Z-201ENST00000584743 97 ntBASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.51□□□□□ -2.01
AP4E1Q9UPM8 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 MIR494-201ENST00000349529 81 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNU6-112P-201ENST00000363599 104 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNU6-1201P-201ENST00000384227 107 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 MIR660-201ENST00000385235 97 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNU6-913P-201ENST00000390913 95 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNU6-644P-201ENST00000391155 98 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 HMGN2P39-201ENST00000398005 273 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNU7-73P-201ENST00000458743 63 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 SNORD123-201ENST00000459473 70 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNA5SP33-201ENST00000516687 98 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNU6-958P-201ENST00000516995 106 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 MIR548AR-201ENST00000582191 57 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 AL020996.3-201ENST00000606617 222 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 MIR6717-201ENST00000622747 73 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 AC091304.10-201ENST00000641554 121 ntBASIC2.5□□□□□ -2.01
AP4E1Q9UPM8 RNY1P10-201ENST00000363268 113 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 RNU6-573P-201ENST00000383938 106 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 SNORA7.5-201ENST00000410672 110 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 RNU7-67P-201ENST00000459003 62 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 DNAJC19P9-201ENST00000555084 351 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 MIR3152-201ENST00000579801 74 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 AC006023.1-201ENST00000603944 259 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 MIR4791-201ENST00000607666 84 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 U7.3-201ENST00000616123 62 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 MIR1291-201ENST00000627649 87 ntBASIC2.49□□□□□ -2.01
AP4E1Q9UPM8 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 MIR21-201ENST00000362134 72 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 Y_RNA.17-201ENST00000362433 111 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 SNORD77B-201ENST00000391112 67 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 RNA5SP501-201ENST00000410990 112 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 AC234781.5-201ENST00000508429 271 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 MIR4709-201ENST00000577272 72 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 MIR4777-201ENST00000583710 86 ntBASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
AP4E1Q9UPM8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
AP4E1Q9UPM8 RNA5SP261-201ENST00000410536 106 ntBASIC2.47□□□□□ -2.01
AP4E1Q9UPM8 snoU13.27-201ENST00000459278 104 ntBASIC2.47□□□□□ -2.01
AP4E1Q9UPM8 RNU6-1018P-201ENST00000516577 106 ntBASIC2.47□□□□□ -2.01
AP4E1Q9UPM8 AC243994.1-201ENST00000618627 109 ntBASIC2.47□□□□□ -2.01
AP4E1Q9UPM8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.47□□□□□ -2.01
AP4E1Q9UPM8 SNORD114-30-201ENST00000364448 72 ntBASIC2.46□□□□□ -2.02
AP4E1Q9UPM8 RNU6-60P-201ENST00000364792 103 ntBASIC2.46□□□□□ -2.02
AP4E1Q9UPM8 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
AP4E1Q9UPM8 RNU2-7P-201ENST00000410794 178 ntBASIC2.46□□□□□ -2.02
AP4E1Q9UPM8 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms