Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 SNORD36C-201ENST00000516733 66 ntBASIC1.56□□□□□ -2.16
VPS4AQ9UN37 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
VPS4AQ9UN37 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.56□□□□□ -2.16
VPS4AQ9UN37 SNORD115-34-201ENST00000362441 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-12-201ENST00000362583 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-29-201ENST00000362834 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-9-201ENST00000362912 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-21-201ENST00000362963 81 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-14-201ENST00000363090 81 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-13-201ENST00000363358 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-41-201ENST00000363608 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-11-201ENST00000363616 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-5-201ENST00000363633 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-39-201ENST00000363694 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-4-201ENST00000363810 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-16-201ENST00000363887 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-6-201ENST00000363942 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-42-201ENST00000364273 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-15-201ENST00000364809 81 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-1-201ENST00000364961 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-26-201ENST00000365067 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-10-201ENST00000365073 81 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORA1.2-201ENST00000365189 134 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-43-201ENST00000365503 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-36-201ENST00000365629 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU6-1336P-201ENST00000383886 109 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU6-1189P-201ENST00000383958 107 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORA24-201ENST00000384096 131 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 Y_RNA.440-201ENST00000384120 114 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 Y_RNA.494-201ENST00000384432 111 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 Y_RNA.497-201ENST00000384447 98 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD28B-201ENST00000390993 75 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 AL451046.2-201ENST00000403074 277 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU6-322P-201ENST00000516010 103 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU7-43P-201ENST00000516554 64 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORA18.7-201ENST00000516910 131 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU7-181P-201ENST00000517234 74 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 AP003484.1-201ENST00000530974 250 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 AC112693.2-201ENST00000556538 232 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SNORD115-40-201ENST00000606510 82 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 GHRLOS.1-201ENST00000610995 70 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 MIR8063-201ENST00000621930 81 ntBASIC1.55□□□□□ -2.16
VPS4AQ9UN37 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS4AQ9UN37 RNU4-11P-201ENST00000365287 132 ntBASIC1.54□□□□□ -2.16
VPS4AQ9UN37 RPS26P48-201ENST00000491713 339 ntBASIC1.54□□□□□ -2.16
VPS4AQ9UN37 SNORA18.4-201ENST00000516440 124 ntBASIC1.54□□□□□ -2.16
VPS4AQ9UN37 MIR548X2-201ENST00000579776 100 ntBASIC1.54□□□□□ -2.16
VPS4AQ9UN37 AC131055.1-201ENST00000584626 316 ntBASIC1.54□□□□□ -2.16
VPS4AQ9UN37 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS4AQ9UN37 SNORD50.2-201ENST00000365465 70 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 Y_RNA.537-201ENST00000384626 109 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 MIR569-201ENST00000385228 96 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 MIR613-201ENST00000385248 95 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 SNX2P2-201ENST00000424553 323 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 SUMO1P3-201ENST00000439961 304 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 RNA5SP236-201ENST00000516169 116 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 Y_RNA.703-201ENST00000516846 111 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 MIR4764-201ENST00000580680 88 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 MIR4452-201ENST00000583004 71 ntBASIC1.53□□□□□ -2.16
VPS4AQ9UN37 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
VPS4AQ9UN37 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
VPS4AQ9UN37 Y_RNA.52-201ENST00000362760 96 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 Y_RNA.370-201ENST00000365589 108 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 RPS27P16-201ENST00000425758 201 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 RNU6-922P-201ENST00000516753 99 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 RNU2-60P-201ENST00000517290 128 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS4AQ9UN37 MIR3664-201ENST00000579074 99 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
VPS4AQ9UN37 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS4AQ9UN37 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS4AQ9UN37 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS4AQ9UN37 AP000648.3-201ENST00000623539 4507 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 SNORA27-201ENST00000384323 126 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 AL603908.1-201ENST00000406098 201 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 RNU6-346P-201ENST00000516288 111 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 MIR3133-201ENST00000583157 78 ntBASIC1.51□□□□□ -2.17
VPS4AQ9UN37 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
VPS4AQ9UN37 Y_RNA.241-201ENST00000364470 117 ntBASIC1.5□□□□□ -2.17
VPS4AQ9UN37 Y_RNA.488-201ENST00000384403 102 ntBASIC1.5□□□□□ -2.17
VPS4AQ9UN37 SNORD37.2-201ENST00000391075 66 ntBASIC1.5□□□□□ -2.17
VPS4AQ9UN37 RNU6-165P-201ENST00000517170 99 ntBASIC1.5□□□□□ -2.17
VPS4AQ9UN37 AL512310.8-201ENST00000550183 120 ntBASIC1.5□□□□□ -2.17
VPS4AQ9UN37 AL096861.1-201ENST00000610899 123 ntBASIC1.5□□□□□ -2.17
VPS4AQ9UN37 AP001340.1-201ENST00000624405 217 ntBASIC1.5□□□□□ -2.17
VPS4AQ9UN37 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 Y_RNA.568-201ENST00000384742 113 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms