Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 MIR573-201ENST00000384964 99 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 TRBVB-201ENST00000477100 408 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 SNORD36C-201ENST00000516733 66 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 RNU6-570P-201ENST00000517051 105 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 MIR8055-201ENST00000610739 97 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 Z97988.1-201ENST00000637697 135 ntBASIC0.47□□□□□ -2.33
RIMS3Q9UJD0 Y_RNA.572-201ENST00000384757 98 ntBASIC0.46□□□□□ -2.34
RIMS3Q9UJD0 RNU6-713P-201ENST00000384761 107 ntBASIC0.46□□□□□ -2.34
RIMS3Q9UJD0 RNU6-913P-201ENST00000390913 95 ntBASIC0.46□□□□□ -2.34
RIMS3Q9UJD0 RNU2-70P-201ENST00000410718 179 ntBASIC0.46□□□□□ -2.34
RIMS3Q9UJD0 RPS29P1-201ENST00000465274 159 ntBASIC0.46□□□□□ -2.34
RIMS3Q9UJD0 Z83818.1-201ENST00000603584 150 ntBASIC0.46□□□□□ -2.34
RIMS3Q9UJD0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.66-201ENST00000362862 102 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.117-201ENST00000363294 101 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 SNORA1.1-201ENST00000364671 133 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 SNORA36.2-201ENST00000384004 127 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 MIR520H-201ENST00000385126 88 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 RNU6-1109P-201ENST00000391187 107 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 MIR18B-201ENST00000454574 71 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 RNU7-96P-201ENST00000459535 64 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 RNA5SP153-201ENST00000516498 76 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 MIR4452-201ENST00000583004 71 ntBASIC0.45□□□□□ -2.34
RIMS3Q9UJD0 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 RNU6-740P-201ENST00000364734 105 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 RNU6-1227P-201ENST00000383981 107 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 RNU6-177P-201ENST00000411257 104 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 AF228730.3-201ENST00000436691 102 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 SNORD2.1-201ENST00000458762 69 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 MIR4804-201ENST00000581683 73 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 MIR4676-201ENST00000583078 72 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 U2.14-201ENST00000615943 113 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 AP001282.2-201ENST00000616149 309 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 U6.104-201ENST00000637979 90 ntBASIC0.44□□□□□ -2.34
RIMS3Q9UJD0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.11-201ENST00000362375 109 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.82-201ENST00000363000 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.92-201ENST00000363043 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.235-201ENST00000364412 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.237-201ENST00000364439 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.306-201ENST00000365015 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.312-201ENST00000365089 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.322-201ENST00000365151 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 RNU6-484P-201ENST00000384016 107 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 SNORD77.3-201ENST00000391113 65 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 MIR548I3-201ENST00000408378 149 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.650-201ENST00000459002 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 RNU6-998P-201ENST00000515894 101 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.777-201ENST00000516982 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.771-201ENST00000598668 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 AC097639.2-201ENST00000603159 172 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 MIR6740-201ENST00000618268 113 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 MIR6788-201ENST00000618842 66 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.789-201ENST00000622480 102 ntBASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RIMS3Q9UJD0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 MIR335-201ENST00000362173 94 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.91-201ENST00000363042 107 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.422-201ENST00000384054 114 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 MIR588-201ENST00000384900 83 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 MIR140-201ENST00000385282 100 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 MIR616-201ENST00000385293 97 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 RNU6-1228P-201ENST00000391014 107 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 RNU6-602P-201ENST00000411155 105 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 AC015818.7-201ENST00000428754 109 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 HMGN1P33-201ENST00000432945 451 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 AC087499.7-201ENST00000441958 109 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 RNU2-11P-201ENST00000459191 187 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 AC020891.4-201ENST00000605745 93 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 AC010332.2-201ENST00000613083 1904 ntBASIC0.42□□□□□ -2.34
RIMS3Q9UJD0 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 RNY1P8-201ENST00000383970 114 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.440-201ENST00000384120 114 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 MIR499A-201ENST00000384903 122 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 MT-TT-201ENST00000387460 66 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 MIR938-201ENST00000401216 83 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 AL606845.1-201ENST00000404881 255 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.590-201ENST00000410140 107 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 AL138752.1-201ENST00000452964 351 ntBASIC0.41□□□□□ -2.34
RIMS3Q9UJD0 SNRPGP8-201ENST00000454064 226 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms