Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 MIR376A1-201ENST00000616574 68 ntBASIC0.1□□□□□ -2.39
CHRNA9Q9UGM1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 SNORA8.2-201ENST00000384372 139 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-130P-201ENST00000411112 103 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-938P-201ENST00000411285 103 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 MTCO2P24-201ENST00000515611 426 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-135P-201ENST00000516769 101 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 MIR3678-201ENST00000578455 94 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 AL049861.1-201ENST00000603130 150 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 AC037487.3-201ENST00000606668 112 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 PART1_1.1-201ENST00000611761 217 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 AC122108.2-201ENST00000611946 526 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 AC090574.1-201ENST00000623186 233 ntBASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.09□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.263-201ENST00000364659 114 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 MIR489-201ENST00000384923 84 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 AC069113.3-201ENST00000521019 150 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 AC100767.1-201ENST00000528178 123 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 AC006157.1-201ENST00000611750 366 ntBASIC0.08□□□□□ -2.4
CHRNA9Q9UGM1 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-326P-201ENST00000365480 107 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 HSPE1P25-201ENST00000455484 251 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-998P-201ENST00000515894 101 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.715-201ENST00000517082 110 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 MIR4514-201ENST00000581410 57 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 AC008608.1-201ENST00000603910 127 ntBASIC0.07□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 RNY1P4-201ENST00000384595 115 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-383P-201ENST00000410864 94 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-469P-201ENST00000516253 101 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 AC131281.1-201ENST00000522984 164 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 RAC1P9-201ENST00000604990 392 ntBASIC0.06□□□□□ -2.4
CHRNA9Q9UGM1 MIR30D-201ENST00000362283 70 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.80-201ENST00000362996 102 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 RNU4-67P-201ENST00000364569 141 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 MIR613-201ENST00000385248 95 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-1009P-201ENST00000390996 107 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 SNORA53-201ENST00000391141 249 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 MIR548I3-201ENST00000408378 149 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 MRPS35P2-201ENST00000508242 191 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 RNA5SP268-201ENST00000516828 124 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.721-201ENST00000517207 102 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 uc_338.6-201ENST00000613544 171 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-290P-201ENST00000365212 101 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.395-201ENST00000383945 109 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 RNY3P5-201ENST00000384127 102 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-514P-201ENST00000384208 107 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.485-201ENST00000384395 102 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 AC073261.1-201ENST00000429409 121 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 RNA5SP153-201ENST00000516498 76 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 SNORD61-201ENST00000384252 73 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 MIR193B-201ENST00000384907 83 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 MIR548A2-201ENST00000384956 97 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 RNU6-1046P-201ENST00000516538 107 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 SNORA25.18-201ENST00000607153 114 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 AC090971.5-201ENST00000621102 293 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
CHRNA9Q9UGM1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 Y_RNA.390-201ENST00000383932 102 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 PMCHL1-202ENST00000423102 261 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 AL512326.2-201ENST00000426359 151 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 AL731563.1-201ENST00000442202 214 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 Y_RNA.639-201ENST00000458981 102 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 RNU2-11P-201ENST00000459191 187 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 RNA5SP227-201ENST00000516184 113 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 RNU6-875P-201ENST00000516488 106 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 AP001282.2-201ENST00000616149 309 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 AC007485.1-201ENST00000616755 206 ntBASIC0.02□□□□□ -2.41
CHRNA9Q9UGM1 SNORA25.1-201ENST00000362326 128 ntBASIC0.01□□□□□ -2.41
CHRNA9Q9UGM1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.01□□□□□ -2.41
CHRNA9Q9UGM1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
CHRNA9Q9UGM1 MIR1252-201ENST00000408861 65 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms