Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RNU6-175P-201ENST00000516896 107 ntBASIC-1.16□□□□□ -2.6
COMMD3Q9UBI1 AL021707.8-201ENST00000609428 183 ntBASIC-1.16□□□□□ -2.6
COMMD3Q9UBI1 AC022960.3-201ENST00000619794 441 ntBASIC-1.16□□□□□ -2.6
COMMD3Q9UBI1 SNORD114-29-201ENST00000364819 70 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 MTND2P9-201ENST00000422293 931 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 SCARNA1-201ENST00000517138 166 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 AP001328.1-201ENST00000528550 176 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 MIR6851-201ENST00000617060 67 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 AC091931.1-201ENST00000623488 728 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 MIR6841-201ENST00000637129 72 ntBASIC-1.17□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 MIR539-201ENST00000365690 78 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU6-900P-201ENST00000384498 102 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 SNORD56B-201ENST00000384713 71 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 MIR626-201ENST00000385032 94 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 SNORD83B-201ENST00000386745 93 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 AC074085.1-201ENST00000413598 418 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 MTND1P2-201ENST00000430604 821 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 AL160004.2-201ENST00000432935 350 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU7-74P-201ENST00000459104 62 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU7-141P-201ENST00000459304 62 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU7-45P-201ENST00000459460 63 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU1-54P-201ENST00000517181 120 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 MIR4662B-201ENST00000579498 81 ntBASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.18□□□□□ -2.6
COMMD3Q9UBI1 RNU6-626P-201ENST00000363354 107 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 RNA5SP133-201ENST00000363368 119 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 SNORD115-47-201ENST00000391226 86 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 AC024067.1-201ENST00000426199 223 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 AL445193.1-201ENST00000441183 141 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 RNU6-693P-201ENST00000516134 107 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 RN7SKP295-201ENST00000517264 153 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 MIR3681-201ENST00000580089 72 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 MIR548H5-201ENST00000580314 60 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 MIR4280-201ENST00000582178 76 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 uc_338.10-201ENST00000621872 182 ntBASIC-1.19□□□□□ -2.6
COMMD3Q9UBI1 MIR302B-201ENST00000362188 73 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 RNU6-888P-201ENST00000363010 101 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 RNU1-141P-201ENST00000364623 158 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 RNU6-449P-201ENST00000383914 107 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 AL365203.2-201ENST00000423444 196 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 MTND4P28-201ENST00000426217 387 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 MIR4473-201ENST00000583731 91 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 Z69908.1-201ENST00000622603 247 ntBASIC-1.2□□□□□ -2.6
COMMD3Q9UBI1 SNORD114-15-201ENST00000364687 72 ntBASIC-1.21□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.21□□□□□ -2.6
COMMD3Q9UBI1 SNORA18-201ENST00000384416 132 ntBASIC-1.21□□□□□ -2.6
COMMD3Q9UBI1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
COMMD3Q9UBI1 MIR548AX-201ENST00000580117 73 ntBASIC-1.21□□□□□ -2.6
COMMD3Q9UBI1 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.21□□□□□ -2.6
COMMD3Q9UBI1 AC069503.3-201ENST00000618674 145 ntBASIC-1.21□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 SNORD61-201ENST00000384252 73 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 MIR635-201ENST00000384830 98 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 MTATP6P23-201ENST00000440153 476 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 SNORD77.4-201ENST00000516158 81 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 MIR3920-201ENST00000581751 86 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 MIR3942-201ENST00000585264 109 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 DEFB117-201ENST00000602356 141 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 RNU7-10P-201ENST00000607194 63 ntBASIC-1.22□□□□□ -2.6
COMMD3Q9UBI1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 SNORA72.4-201ENST00000384174 132 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 RNY3P4-201ENST00000384428 101 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 RNU6-901P-201ENST00000384593 106 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 SNORD78.2-201ENST00000391076 69 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 SEPT14P3-201ENST00000439401 183 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 AL732372.2-207ENST00000445840 183 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 AC097635.1-201ENST00000450678 155 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 SEPT14P2-201ENST00000453405 183 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 SEPT14P4-201ENST00000513445 186 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 RNU6-126P-201ENST00000516685 103 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 FO082796.1-201ENST00000523795 183 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 U6.109-201ENST00000636749 87 ntBASIC-1.23□□□□□ -2.61
COMMD3Q9UBI1 MIR342-201ENST00000362212 99 ntBASIC-1.24□□□□□ -2.61
COMMD3Q9UBI1 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.24□□□□□ -2.61
COMMD3Q9UBI1 MIR599-201ENST00000385069 95 ntBASIC-1.24□□□□□ -2.61
COMMD3Q9UBI1 AF228730.3-201ENST00000436691 102 ntBASIC-1.24□□□□□ -2.61
COMMD3Q9UBI1 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.24□□□□□ -2.61
COMMD3Q9UBI1 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.25□□□□□ -2.61
COMMD3Q9UBI1 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.25□□□□□ -2.61
COMMD3Q9UBI1 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms