Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
SMPD3Q9NY59 AL731563.1-201ENST00000442202 214 ntBASIC0.43□□□□□ -2.34
SMPD3Q9NY59 RNU7-62P-201ENST00000458856 62 ntBASIC0.43□□□□□ -2.34
SMPD3Q9NY59 SNORA18.4-201ENST00000516440 124 ntBASIC0.43□□□□□ -2.34
SMPD3Q9NY59 RNU7-53P-201ENST00000516705 60 ntBASIC0.43□□□□□ -2.34
SMPD3Q9NY59 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.43□□□□□ -2.34
SMPD3Q9NY59 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.43□□□□□ -2.34
SMPD3Q9NY59 MIR1273G-201ENST00000577677 100 ntBASIC0.43□□□□□ -2.34
SMPD3Q9NY59 MIR3171-201ENST00000584270 74 ntBASIC0.43□□□□□ -2.34
SMPD3Q9NY59 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
SMPD3Q9NY59 Y_RNA.26-201ENST00000362539 101 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 Y_RNA.37-201ENST00000362606 108 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 RNU4-10P-201ENST00000364383 140 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SNORA63C-201ENST00000364578 129 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 Y_RNA.354-201ENST00000365448 111 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SNORD24-201ENST00000383884 75 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SNORA27-201ENST00000384323 126 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SNORA8.3-201ENST00000384679 139 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SNORD38B-201ENST00000384690 67 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 MIR518F-201ENST00000384973 87 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 RNU7-73P-201ENST00000458743 63 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SERF1AP1-201ENST00000514575 187 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 RNU6-365P-201ENST00000517113 106 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 AC100767.1-201ENST00000528178 123 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 MIR4680-201ENST00000580906 66 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 PVT1_3.1-201ENST00000620853 95 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 SNORD38B-202ENST00000625943 69 ntBASIC0.42□□□□□ -2.34
SMPD3Q9NY59 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.42□□□□□ -2.34
SMPD3Q9NY59 UBE2WP1-201ENST00000362030 340 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 Y_RNA.24-201ENST00000362508 103 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 Y_RNA.84-201ENST00000363011 104 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 RNA5SP325-201ENST00000363756 130 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 Y_RNA.216-201ENST00000364205 93 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 SNORD61-201ENST00000384252 73 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 RNU6-938P-201ENST00000411285 103 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 AC113618.1-201ENST00000416747 285 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 AC015818.7-201ENST00000428754 109 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 AC087499.7-201ENST00000441958 109 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 RPS29P24-201ENST00000486345 171 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 SCARNA24.2-201ENST00000516968 130 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 RNU6-1270P-201ENST00000517128 108 ntBASIC0.41□□□□□ -2.34
SMPD3Q9NY59 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.41□□□□□ -2.34
SMPD3Q9NY59 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SMPD3Q9NY59 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
SMPD3Q9NY59 RNU1-133P-201ENST00000364867 167 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 RNU4-45P-201ENST00000365469 141 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 MIR548A2-201ENST00000384956 97 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 MIR140-201ENST00000385282 100 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 RNU6-913P-201ENST00000390913 95 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.4□□□□□ -2.35
SMPD3Q9NY59 RNU6-504P-201ENST00000516568 104 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.4□□□□□ -2.35
SMPD3Q9NY59 MIR4804-201ENST00000581683 73 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 AC010487.4-201ENST00000637027 61 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 MIR924-201ENST00000638017 53 ntBASIC0.4□□□□□ -2.35
SMPD3Q9NY59 RNU6-888P-201ENST00000363010 101 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 Y_RNA.202-201ENST00000364083 110 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 Y_RNA.229-201ENST00000364347 113 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 RNU6-211P-201ENST00000384047 107 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 RNU6-1289P-201ENST00000384431 106 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 SNORA26-201ENST00000391286 122 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 RNU6-177P-201ENST00000411257 104 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.39□□□□□ -2.35
SMPD3Q9NY59 MTND5P22-201ENST00000458380 195 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 RNU6-1338P-201ENST00000516328 91 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 SNORD36C-201ENST00000516733 66 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 MIR4676-201ENST00000583078 72 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 MIR8055-201ENST00000610739 97 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 Z97988.1-201ENST00000637697 135 ntBASIC0.39□□□□□ -2.35
SMPD3Q9NY59 Y_RNA.153-201ENST00000363615 91 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 Y_RNA.251-201ENST00000364551 99 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 SNORA1.1-201ENST00000364671 133 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 Y_RNA.275-201ENST00000364726 110 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 Y_RNA.540-201ENST00000384638 111 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 Y_RNA.572-201ENST00000384757 98 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 RNU6-1132P-201ENST00000459214 107 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 RNU6-1299P-201ENST00000516316 100 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 AC020661.2-201ENST00000560114 134 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 AC020891.4-201ENST00000605745 93 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 MIR6740-201ENST00000618268 113 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 AC010332.2-201ENST00000613083 1904 ntBASIC0.38□□□□□ -2.35
SMPD3Q9NY59 MIR626-201ENST00000385032 94 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 RNU6-1203P-201ENST00000410703 110 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 RNU2-70P-201ENST00000410718 179 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 RNA5SP127-201ENST00000411051 133 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 RNU2-55P-201ENST00000411146 174 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 HMGN1P33-201ENST00000432945 451 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 MIR18B-201ENST00000454574 71 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 RNU7-96P-201ENST00000459535 64 ntBASIC0.37□□□□□ -2.35
SMPD3Q9NY59 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms