Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.64□□□□□ -2.15
MKS1Q9NXB0 MIR548X2-201ENST00000579776 100 ntBASIC1.64□□□□□ -2.15
MKS1Q9NXB0 Y_RNA.215-201ENST00000364204 112 ntBASIC1.63□□□□□ -2.15
MKS1Q9NXB0 RNY1P5-201ENST00000383890 115 ntBASIC1.63□□□□□ -2.15
MKS1Q9NXB0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.63□□□□□ -2.15
MKS1Q9NXB0 Y_RNA.584-201ENST00000391090 114 ntBASIC1.63□□□□□ -2.15
MKS1Q9NXB0 RNU7-197P-201ENST00000458836 62 ntBASIC1.63□□□□□ -2.15
MKS1Q9NXB0 RNU1-98P-201ENST00000458992 160 ntBASIC1.63□□□□□ -2.15
MKS1Q9NXB0 RNU7-53P-201ENST00000516705 60 ntBASIC1.63□□□□□ -2.15
MKS1Q9NXB0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
MKS1Q9NXB0 MIR342-201ENST00000362212 99 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 Y_RNA.506-201ENST00000384494 102 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 AC009474.2-201ENST00000451383 136 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 RNU7-73P-201ENST00000458743 63 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 RNU2-11P-201ENST00000459191 187 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 snoU13.16-201ENST00000459350 104 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 RNU7-70P-201ENST00000516941 66 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.62□□□□□ -2.15
MKS1Q9NXB0 AP003716.2-201ENST00000528260 108 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 MIR8065-201ENST00000620577 100 ntBASIC1.62□□□□□ -2.15
MKS1Q9NXB0 AC245047.7-201ENST00000440265 293 ntBASIC1.61□□□□□ -2.15
MKS1Q9NXB0 AC048334.1-201ENST00000477975 159 ntBASIC1.61□□□□□ -2.15
MKS1Q9NXB0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
MKS1Q9NXB0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.61□□□□□ -2.15
MKS1Q9NXB0 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
MKS1Q9NXB0 AC091932.4-201ENST00000623386 200 ntBASIC1.61□□□□□ -2.15
MKS1Q9NXB0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
MKS1Q9NXB0 SNORA25.3-201ENST00000363205 127 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 Y_RNA.488-201ENST00000384403 102 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 MIR569-201ENST00000385228 96 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 RNU6-913P-201ENST00000390913 95 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 MIR1261-201ENST00000408659 82 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 snoU13.15-201ENST00000459407 104 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 SNORA31.2-201ENST00000516019 134 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 RNA5SP236-201ENST00000516169 116 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 SNORA25.12-201ENST00000516202 82 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 RNU2-60P-201ENST00000517290 128 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 MIR548AO-201ENST00000579992 96 ntBASIC1.6□□□□□ -2.15
MKS1Q9NXB0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.6□□□□□ -2.15
MKS1Q9NXB0 AL596211.1-201ENST00000569873 2277 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 MIR302B-201ENST00000362188 73 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 RNA5SP264-201ENST00000363115 107 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 RNU1-133P-201ENST00000364867 167 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 MIR583-201ENST00000384846 75 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 MTATP6P21-201ENST00000440681 189 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 snoU13.26-201ENST00000459452 105 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 RNU6-346P-201ENST00000516288 111 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.59□□□□□ -2.15
MKS1Q9NXB0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
MKS1Q9NXB0 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
MKS1Q9NXB0 Y_RNA.120-201ENST00000363304 110 ntBASIC1.58□□□□□ -2.16
MKS1Q9NXB0 RNU6-460P-201ENST00000391158 108 ntBASIC1.58□□□□□ -2.16
MKS1Q9NXB0 AL020996.3-201ENST00000606617 222 ntBASIC1.58□□□□□ -2.16
MKS1Q9NXB0 U8.1-201ENST00000362843 134 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 SNORD18B-201ENST00000365659 72 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 RNU6-125P-201ENST00000384505 107 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 MIR1302-7-201ENST00000408841 72 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 SNORA31.4-201ENST00000516049 129 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 AP000942.3-201ENST00000603702 160 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 MIR8055-201ENST00000610739 97 ntBASIC1.57□□□□□ -2.16
MKS1Q9NXB0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MKS1Q9NXB0 MIR103A2-201ENST00000362154 78 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 RNU6-746P-201ENST00000384112 109 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 U8.13-201ENST00000390842 128 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 MIR1185-1-201ENST00000408598 86 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 AL392103.1-201ENST00000447000 198 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 Y_RNA.686-201ENST00000516548 134 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 Y_RNA.703-201ENST00000516846 111 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 MIR4298-201ENST00000584380 73 ntBASIC1.56□□□□□ -2.16
MKS1Q9NXB0 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
MKS1Q9NXB0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.55□□□□□ -2.16
MKS1Q9NXB0 MIR3133-201ENST00000583157 78 ntBASIC1.55□□□□□ -2.16
MKS1Q9NXB0 RNU6-774P-201ENST00000363238 107 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 Y_RNA.343-201ENST00000365354 112 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 Y_RNA.420-201ENST00000384043 110 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 AL603914.1-201ENST00000401964 204 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 RNU6-955P-201ENST00000410497 104 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 RNU7-45P-201ENST00000459460 63 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 RNU6-426P-201ENST00000516464 97 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 Y_RNA.690-201ENST00000516603 95 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 RNU6-295P-201ENST00000516901 104 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 MIR6845-201ENST00000613182 61 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 AP001340.1-201ENST00000624405 217 ntBASIC1.54□□□□□ -2.16
MKS1Q9NXB0 RNU6-915P-201ENST00000364943 103 ntBASIC1.53□□□□□ -2.16
MKS1Q9NXB0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.53□□□□□ -2.16
MKS1Q9NXB0 RNU6-910P-201ENST00000390844 107 ntBASIC1.53□□□□□ -2.16
MKS1Q9NXB0 MIR1289-2-201ENST00000408360 111 ntBASIC1.53□□□□□ -2.16
MKS1Q9NXB0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.53□□□□□ -2.16
MKS1Q9NXB0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.53□□□□□ -2.16
MKS1Q9NXB0 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
MKS1Q9NXB0 Z97988.1-201ENST00000637697 135 ntBASIC1.53□□□□□ -2.16
MKS1Q9NXB0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.17
MKS1Q9NXB0 RNA5SP327-201ENST00000362494 101 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms