Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 AL022718.1-201ENST00000412004 84 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 RNU7-45P-201ENST00000459460 63 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 RNU7-6P-201ENST00000516845 62 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.53□□□□□ -2
TMEM39AQ9NV64 MIR5009-201ENST00000578736 100 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 SNORA70.7-201ENST00000384159 133 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 MIR526A1-201ENST00000384897 85 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 RNA5SP100-201ENST00000410903 110 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 RNA5SP59-201ENST00000410922 110 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 AL512326.2-201ENST00000426359 151 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 RNU7-67P-201ENST00000459003 62 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 RNU6-958P-201ENST00000516995 106 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
TMEM39AQ9NV64 Y_RNA.4-201ENST00000362333 112 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 RNU6-1113P-201ENST00000384348 107 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 SNORD123-201ENST00000459473 70 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 RNU7-193P-201ENST00000516723 65 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 SNORA31.25-201ENST00000517242 134 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 AC004812.1-201ENST00000540773 146 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 MIR4529-201ENST00000578110 78 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 MIR548AR-201ENST00000582191 57 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TMEM39AQ9NV64 MIR424-201ENST00000362227 98 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 RNY4P30-201ENST00000410216 95 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 RNU7-53P-201ENST00000516705 60 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 RNU6-295P-201ENST00000516901 104 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 MIR5582-201ENST00000579697 68 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 AC006254.2-201ENST00000603259 279 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TMEM39AQ9NV64 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 RNU1-138P-201ENST00000384093 164 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 Y_RNA.531-201ENST00000384589 121 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 SNORD28B-201ENST00000390993 75 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 POLR2J4-204ENST00000418424 324 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 RPS29P29-201ENST00000456396 171 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 SNORA31.17-201ENST00000516953 127 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.49□□□□□ -2.01
TMEM39AQ9NV64 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 RNU6-1319P-201ENST00000390855 104 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 RNU6-747P-201ENST00000390928 104 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 RNU6-241P-201ENST00000391148 104 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 RNU6-177P-201ENST00000411257 104 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 RPS23P4-201ENST00000487908 423 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 RNU2-13P-201ENST00000515909 113 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 MIR3152-201ENST00000579801 74 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 FAM106DP-201ENST00000586416 501 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 AP001318.4-201ENST00000616637 121 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 AC243994.1-201ENST00000618627 109 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 AL162726.3-218ENST00000636401 95 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 MIR4679-1-201ENST00000637619 75 ntBASIC2.48□□□□□ -2.01
TMEM39AQ9NV64 RNU6-457P-201ENST00000363999 107 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 Y_RNA.348-201ENST00000365403 103 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 SNORA51.10-201ENST00000384418 136 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 AL023284.1-201ENST00000403956 276 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 RPL39P25-201ENST00000449384 154 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 RNU6-893P-201ENST00000458841 100 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 AP000942.3-201ENST00000603702 160 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
TMEM39AQ9NV64 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.01
TMEM39AQ9NV64 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 Y_RNA.171-201ENST00000363760 102 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 SNORA24-201ENST00000384096 131 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 RNU6-905P-201ENST00000384434 107 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 RNU6-816P-201ENST00000390914 107 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 RNU6-360P-201ENST00000390944 104 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 RNU6-1268P-201ENST00000391214 107 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 RNU6-1239P-201ENST00000391310 107 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 SNORA26.9-201ENST00000391322 122 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 RNU7-113P-201ENST00000459273 62 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 AL513534.2-201ENST00000603836 250 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 MIR4791-201ENST00000607666 84 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 AC087741.2-201ENST00000619415 172 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 AP000648.3-201ENST00000623539 4507 ntBASIC2.46□□□□□ -2.02
TMEM39AQ9NV64 Y_RNA.544-201ENST00000384650 113 ntBASIC2.45□□□□□ -2.02
TMEM39AQ9NV64 U8.13-201ENST00000390842 128 ntBASIC2.45□□□□□ -2.02
TMEM39AQ9NV64 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms