Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MTND5P22-201ENST00000458380 195 ntBASIC0.71□□□□□ -2.3
BLOC1S4Q9NUP1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.71□□□□□ -2.3
BLOC1S4Q9NUP1 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
BLOC1S4Q9NUP1 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
BLOC1S4Q9NUP1 U2.14-201ENST00000615943 113 ntBASIC0.71□□□□□ -2.3
BLOC1S4Q9NUP1 Z97988.1-201ENST00000637697 135 ntBASIC0.71□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.82-201ENST00000363000 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.92-201ENST00000363043 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.235-201ENST00000364412 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.306-201ENST00000365015 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.312-201ENST00000365089 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.322-201ENST00000365151 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.650-201ENST00000459002 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.777-201ENST00000516982 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.771-201ENST00000598668 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.789-201ENST00000622480 102 ntBASIC0.7□□□□□ -2.3
BLOC1S4Q9NUP1 SNORA1.1-201ENST00000364671 133 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 MIR548A2-201ENST00000384956 97 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-1228P-201ENST00000391014 107 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 MIR548J-201ENST00000408833 112 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-938P-201ENST00000411285 103 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 MIR18B-201ENST00000454574 71 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 SNORD2.1-201ENST00000458762 69 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 MIR8055-201ENST00000610739 97 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 RMST_2.1-201ENST00000617263 136 ntBASIC0.69□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 MIR520F-201ENST00000384824 87 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 MIR616-201ENST00000385293 97 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 SNORD77.3-201ENST00000391113 65 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 MIR4771-2-201ENST00000577758 74 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 MIR4771-1-201ENST00000582617 74 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 MIR151B-201ENST00000584249 96 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 AP001282.2-201ENST00000616149 309 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.117-201ENST00000363294 101 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.237-201ENST00000364439 102 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-740P-201ENST00000364734 105 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 MIR1302-6-201ENST00000408466 90 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 RNA5SP261-201ENST00000410536 106 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 SNORD83.1-201ENST00000411362 77 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 AC244023.1-201ENST00000426884 112 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 SNORD36C-201ENST00000516733 66 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 AC097639.2-201ENST00000603159 172 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 AC242498.1-201ENST00000604134 111 ntBASIC0.67□□□□□ -2.3
BLOC1S4Q9NUP1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-484P-201ENST00000384016 107 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-913P-201ENST00000390913 95 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 SNORA79-201ENST00000408376 140 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-998P-201ENST00000515894 101 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 AC006504.6-201ENST00000590142 199 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 MIR6734-201ENST00000621166 68 ntBASIC0.66□□□□□ -2.3
BLOC1S4Q9NUP1 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
BLOC1S4Q9NUP1 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
BLOC1S4Q9NUP1 MIR548I3-201ENST00000408378 149 ntBASIC0.65□□□□□ -2.31
BLOC1S4Q9NUP1 AC090844.1-201ENST00000422019 156 ntBASIC0.65□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.64□□□□□ -2.31
BLOC1S4Q9NUP1 AL606845.1-201ENST00000404881 255 ntBASIC0.64□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-177P-201ENST00000411257 104 ntBASIC0.64□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-635P-201ENST00000516651 102 ntBASIC0.64□□□□□ -2.31
BLOC1S4Q9NUP1 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
BLOC1S4Q9NUP1 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 AF228730.3-201ENST00000436691 102 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 RNU2-11P-201ENST00000459191 187 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 snoU13.21-201ENST00000459368 105 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 RNA5SP220-201ENST00000516298 104 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 AL442663.2-201ENST00000554385 511 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.63□□□□□ -2.31
BLOC1S4Q9NUP1 MIR302B-201ENST00000362188 73 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 MIR588-201ENST00000384900 83 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 MIR938-201ENST00000401216 83 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 288.8 ms