Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
CCM2LQ9NUG4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CCM2LQ9NUG4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
CCM2LQ9NUG4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCM2LQ9NUG4 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 SNORD28B-201ENST00000390993 75 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 SNORA17.3-201ENST00000391159 129 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 RNU7-96P-201ENST00000459535 64 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 RPS26P48-201ENST00000491713 339 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 RNA5SP272-201ENST00000516095 111 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 RNU7-70P-201ENST00000516941 66 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 AC008133.2-201ENST00000624540 351 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 MIR376A2-201ENST00000636782 80 ntBASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCM2LQ9NUG4 RNA5SP48-201ENST00000363969 126 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 MTATP6P21-201ENST00000440681 189 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 RNU7-197P-201ENST00000458836 62 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 RNU7-80P-201ENST00000459562 61 ntBASIC1.76□□□□□ -2.13
CCM2LQ9NUG4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 SNORD18B-201ENST00000365659 72 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 SNORA51.10-201ENST00000384418 136 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 RNU6-321P-201ENST00000410912 106 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 RPS29P29-201ENST00000456396 171 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 RNU2-13P-201ENST00000515909 113 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 RNU7-53P-201ENST00000516705 60 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 MTND5P32-201ENST00000560711 1802 ntBASIC1.75□□□□□ -2.13
CCM2LQ9NUG4 SNORA24-201ENST00000384096 131 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 MIR499A-201ENST00000384903 122 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 RPS27P16-201ENST00000425758 201 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 RNU6-998P-201ENST00000515894 101 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 RNU6-426P-201ENST00000516464 97 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 SCARNA15-202ENST00000516881 127 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 AL512310.8-201ENST00000550183 120 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 MIR4791-201ENST00000607666 84 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 MIR8070-201ENST00000616510 88 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 AC243994.1-201ENST00000618627 109 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.74□□□□□ -2.13
CCM2LQ9NUG4 RNY1P11-201ENST00000363759 113 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 SNORD50.2-201ENST00000365465 70 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 Y_RNA.420-201ENST00000384043 110 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 BTF3P4-201ENST00000418852 495 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 RNU6-902P-201ENST00000517212 91 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 AL121890.5-201ENST00000620848 304 ntBASIC1.73□□□□□ -2.13
CCM2LQ9NUG4 AP000648.3-201ENST00000623539 4507 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 SNORA20-201ENST00000384662 132 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 Y_RNA.568-201ENST00000384742 113 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 MIR613-201ENST00000385248 95 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 RNU6-460P-201ENST00000391158 108 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 AL035398.1-201ENST00000430869 322 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 RNU7-67P-201ENST00000459003 62 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 AP001328.1-201ENST00000528550 176 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 MIR3664-201ENST00000579074 99 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
CCM2LQ9NUG4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 RNU1-133P-201ENST00000364867 167 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 SNORA25.9-201ENST00000365087 128 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 RNA5SP190-201ENST00000365222 118 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 MIR570-201ENST00000384917 97 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 RNU4-61P-201ENST00000411243 107 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 RNA5SP236-201ENST00000516169 116 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 AC091932.4-201ENST00000623386 200 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 AP001340.1-201ENST00000624405 217 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 MIR4251-201ENST00000635819 61 ntBASIC1.71□□□□□ -2.14
CCM2LQ9NUG4 AC010332.2-201ENST00000613083 1904 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 MIR302B-201ENST00000362188 73 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 U8.1-201ENST00000362843 134 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 RNY1P10-201ENST00000363268 113 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 RNU6-915P-201ENST00000364943 103 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 SNORD13-201ENST00000459299 104 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 RNU7-41P-201ENST00000515917 61 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 RNU6-947P-201ENST00000516264 106 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 SNORA25.15-201ENST00000516487 89 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 AL096861.1-201ENST00000610899 123 ntBASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCM2LQ9NUG4 MIR342-201ENST00000362212 99 ntBASIC1.69□□□□□ -2.14
CCM2LQ9NUG4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms