Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 SNORA24-201ENST00000384096 131 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 SNORA40.5-201ENST00000391061 128 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-938P-201ENST00000411285 103 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 RNU7-21P-201ENST00000459430 62 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 SNORA18.4-201ENST00000516440 124 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 AP000942.4-201ENST00000604811 241 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
SLC6A13Q9NSD5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.23-201ENST00000362496 106 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-379P-201ENST00000363813 104 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.410-201ENST00000383992 113 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.435-201ENST00000384095 112 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 AF228730.3-201ENST00000436691 102 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 AL392103.1-201ENST00000447000 198 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 SEPT14P17-201ENST00000617978 177 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 AC141273.2-201ENST00000618989 130 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 MTND1P7-201ENST00000632801 297 ntBASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
SLC6A13Q9NSD5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.182-201ENST00000363880 111 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-275P-201ENST00000364910 107 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 SNORA27-201ENST00000384323 126 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.494-201ENST00000384432 111 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-918P-201ENST00000391219 106 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 MIR1302-7-201ENST00000408841 72 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 AC002429.1-201ENST00000437672 148 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 SNORD36C-201ENST00000516733 66 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 AC130289.1-201ENST00000577321 73 ntBASIC1.12□□□□□ -2.23
SLC6A13Q9NSD5 AC008163.1-202ENST00000636004 2889 ntBASIC1.11□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.75-201ENST00000362927 97 ntBASIC1.11□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.476-201ENST00000384347 108 ntBASIC1.11□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.515-201ENST00000384535 112 ntBASIC1.11□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.542-201ENST00000384641 111 ntBASIC1.11□□□□□ -2.23
SLC6A13Q9NSD5 snoU13.16-201ENST00000459350 104 ntBASIC1.11□□□□□ -2.23
SLC6A13Q9NSD5 MIR548AO-201ENST00000579992 96 ntBASIC1.11□□□□□ -2.23
SLC6A13Q9NSD5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-1020P-201ENST00000363684 107 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-1189P-201ENST00000383958 107 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 SNORA1-201ENST00000384107 130 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.552-201ENST00000384665 112 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 RNU7-67P-201ENST00000459003 62 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 RPS29P24-201ENST00000486345 171 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 SNORD116-25-201ENST00000516517 92 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 MIR378D2-201ENST00000580636 98 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 AL365205.2-201ENST00000594586 68 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.412-201ENST00000384001 104 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-643P-201ENST00000384018 107 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 SNORD77.3-201ENST00000391113 65 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.09□□□□□ -2.23
SLC6A13Q9NSD5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-978P-201ENST00000364371 103 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.274-201ENST00000364714 101 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-47P-201ENST00000383866 107 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.440-201ENST00000384120 114 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 RNU7-73P-201ENST00000458743 63 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 MIR2115-201ENST00000516657 100 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 RNU7-53P-201ENST00000516705 60 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 MIR3129-201ENST00000581095 76 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 AC078938.1-201ENST00000620993 318 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 MIR6516-201ENST00000630554 81 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 U6.106-201ENST00000636360 105 ntBASIC1.08□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-53P-201ENST00000365367 106 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-396P-201ENST00000365369 105 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-1292P-201ENST00000383856 107 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-613P-201ENST00000410412 108 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU7-96P-201ENST00000459535 64 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-958P-201ENST00000516995 106 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-388P-201ENST00000517012 105 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-389P-201ENST00000517048 105 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 MRPS18CP4-201ENST00000535821 231 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 MIR5197-201ENST00000583721 112 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 MIR6504-201ENST00000613520 61 ntBASIC1.07□□□□□ -2.24
SLC6A13Q9NSD5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.297-201ENST00000364950 91 ntBASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.508-201ENST00000384502 114 ntBASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 AL035398.1-201ENST00000430869 322 ntBASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms