Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 RNA5SP458-201ENST00000516188 119 ntBASIC1.37□□□□□ -2.19
NECTIN3Q9NQS3 AL022345.2-201ENST00000606307 135 ntBASIC1.37□□□□□ -2.19
NECTIN3Q9NQS3 MTND1P7-201ENST00000632801 297 ntBASIC1.37□□□□□ -2.19
NECTIN3Q9NQS3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
NECTIN3Q9NQS3 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
NECTIN3Q9NQS3 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
NECTIN3Q9NQS3 BTF3P4-201ENST00000418852 495 ntBASIC1.36□□□□□ -2.19
NECTIN3Q9NQS3 AL603825.1-201ENST00000438481 80 ntBASIC1.36□□□□□ -2.19
NECTIN3Q9NQS3 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
NECTIN3Q9NQS3 RPS29P24-201ENST00000486345 171 ntBASIC1.36□□□□□ -2.19
NECTIN3Q9NQS3 RNU6-978P-201ENST00000364371 103 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 RNU2-13P-201ENST00000515909 113 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 RNU7-40P-201ENST00000516397 64 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 RNU6-794P-201ENST00000517261 64 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 AL365205.2-201ENST00000594586 68 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
NECTIN3Q9NQS3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 SNORA80D-201ENST00000384488 135 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 RNA5SP127-201ENST00000411051 133 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 AL591704.2-201ENST00000421658 181 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 RNU7-53P-201ENST00000516705 60 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 RNU7-70P-201ENST00000516941 66 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 AL512598.1-201ENST00000610158 273 ntBASIC1.34□□□□□ -2.19
NECTIN3Q9NQS3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 MIR378A-201ENST00000362177 66 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 MIR302B-201ENST00000362188 73 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 Y_RNA.240-201ENST00000364469 95 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 AL035398.1-201ENST00000430869 322 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 AC108059.2-201ENST00000434626 151 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 snoU13.16-201ENST00000459350 104 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 RNU7-96P-201ENST00000459535 64 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
NECTIN3Q9NQS3 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-682P-201ENST00000363843 106 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 AC005840.1-201ENST00000498412 377 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 MIR548AO-201ENST00000579992 96 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 MIR5197-201ENST00000583721 112 ntBASIC1.32□□□□□ -2.2
NECTIN3Q9NQS3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 Y_RNA.270-201ENST00000364693 104 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-768P-201ENST00000384683 107 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-239P-201ENST00000390990 99 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 SNORD37.2-201ENST00000391075 66 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 MIR1185-1-201ENST00000408598 86 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 RNU2-11P-201ENST00000459191 187 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 RNU7-80P-201ENST00000459562 61 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.31□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-396P-201ENST00000365369 105 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-597P-201ENST00000365620 102 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 SNORA24-201ENST00000384096 131 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 MRPL35P3-201ENST00000421557 364 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 RNU6-998P-201ENST00000515894 101 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 MIR376A2-201ENST00000636782 80 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 MIR6844-201ENST00000637122 62 ntBASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
NECTIN3Q9NQS3 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 RNU4-84P-201ENST00000364200 139 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 MIR624-201ENST00000385217 97 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 RNU5E-9P-201ENST00000411164 104 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 AC063976.4-201ENST00000421971 163 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 RNU7-90P-201ENST00000459216 62 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 MIR2115-201ENST00000516657 100 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 RNU11-2P-201ENST00000516898 142 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 SEPT14P17-201ENST00000617978 177 ntBASIC1.29□□□□□ -2.2
NECTIN3Q9NQS3 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 MIR548I3-201ENST00000408378 149 ntBASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 RNU7-73P-201ENST00000458743 63 ntBASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 RNU7-21P-201ENST00000459430 62 ntBASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 AC074198.2-201ENST00000508153 258 ntBASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 AP003716.2-201ENST00000528260 108 ntBASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 MIR3668-201ENST00000582138 75 ntBASIC1.28□□□□□ -2.2
NECTIN3Q9NQS3 AC027335.2-201ENST00000624030 375 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms