Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 Y_RNA.441-201ENST00000384123 112 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 AC087499.4-201ENST00000448505 178 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 RNU7-67P-201ENST00000459003 62 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 RPS26P48-201ENST00000491713 339 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 AC005840.1-201ENST00000498412 377 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 MIR3192-201ENST00000584920 77 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 AL157834.3-201ENST00000615543 103 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.27□□□□□ -2.21
PCDH9Q9HC56 MIR3658-201ENST00000636291 56 ntBASIC1.27□□□□□ -2.21
PCDH9Q9HC56 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
PCDH9Q9HC56 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
PCDH9Q9HC56 RNU6-1082P-201ENST00000364574 107 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 RNU6-209P-201ENST00000384118 107 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.542-201ENST00000384641 111 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 RNU6-588P-201ENST00000410281 105 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
PCDH9Q9HC56 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.26□□□□□ -2.21
PCDH9Q9HC56 snoU13.25-201ENST00000458945 104 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 RNU6-1053P-201ENST00000515930 101 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 RNU6-958P-201ENST00000516995 106 ntBASIC1.26□□□□□ -2.21
PCDH9Q9HC56 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.26□□□□□ -2.21
PCDH9Q9HC56 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.26□□□□□ -2.21
PCDH9Q9HC56 SNORA25.3-201ENST00000363205 127 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 RNU6-151P-201ENST00000364158 107 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 RNU6-1130P-201ENST00000365434 107 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 SNORD116-18-201ENST00000383961 92 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.410-201ENST00000383992 113 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 SNORA27-201ENST00000384323 126 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 SNORA51.10-201ENST00000384418 136 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.555-201ENST00000384673 110 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 SNORA40.5-201ENST00000391061 128 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 AL365205.2-201ENST00000594586 68 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 snoU13.31-201ENST00000607291 104 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 MIR4791-201ENST00000607666 84 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 AC243994.1-201ENST00000618627 109 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 AC008133.2-201ENST00000624540 351 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 MIR376A2-201ENST00000636782 80 ntBASIC1.25□□□□□ -2.21
PCDH9Q9HC56 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-34-201ENST00000362441 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-12-201ENST00000362583 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-29-201ENST00000362834 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-9-201ENST00000362912 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-21-201ENST00000362963 81 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-14-201ENST00000363090 81 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-13-201ENST00000363358 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-41-201ENST00000363608 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-11-201ENST00000363616 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-5-201ENST00000363633 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-39-201ENST00000363694 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.164-201ENST00000363709 102 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-4-201ENST00000363810 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-16-201ENST00000363887 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-6-201ENST00000363942 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-42-201ENST00000364273 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-15-201ENST00000364809 81 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 RNU6-818P-201ENST00000364837 108 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-1-201ENST00000364961 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-26-201ENST00000365067 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-10-201ENST00000365073 81 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-43-201ENST00000365503 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 RNU6-597P-201ENST00000365620 102 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-36-201ENST00000365629 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 RNU6-394P-201ENST00000410735 107 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 RNA5SP127-201ENST00000411051 133 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.24□□□□□ -2.21
PCDH9Q9HC56 MIR4498-201ENST00000577599 66 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 MIR3144-201ENST00000579460 79 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 DNAJC19P2-201ENST00000593340 302 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 SNORD115-40-201ENST00000606510 82 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
PCDH9Q9HC56 AC021753.1-201ENST00000635724 168 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 MIR4251-201ENST00000635819 61 ntBASIC1.24□□□□□ -2.21
PCDH9Q9HC56 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.24□□□□□ -2.21
PCDH9Q9HC56 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.23□□□□□ -2.21
PCDH9Q9HC56 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.351-201ENST00000365436 96 ntBASIC1.23□□□□□ -2.21
PCDH9Q9HC56 RNU6-449P-201ENST00000383914 107 ntBASIC1.23□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.398-201ENST00000383952 99 ntBASIC1.23□□□□□ -2.21
PCDH9Q9HC56 AC048334.1-201ENST00000477975 159 ntBASIC1.23□□□□□ -2.21
PCDH9Q9HC56 RNU7-121P-201ENST00000516604 62 ntBASIC1.23□□□□□ -2.21
PCDH9Q9HC56 MIR8065-201ENST00000620577 100 ntBASIC1.23□□□□□ -2.21
PCDH9Q9HC56 MIR337-201ENST00000362281 93 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.180-201ENST00000363867 113 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 RNU4-11P-201ENST00000365287 132 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 RNU6-1292P-201ENST00000383856 107 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.440-201ENST00000384120 114 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.537-201ENST00000384626 109 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 RNU2-13P-201ENST00000515909 113 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 MTND5P41-201ENST00000517498 206 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 MTND1P7-201ENST00000632801 297 ntBASIC1.22□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.4-201ENST00000362333 112 ntBASIC1.21□□□□□ -2.22
PCDH9Q9HC56 SNORA75.5-201ENST00000391291 81 ntBASIC1.21□□□□□ -2.22
PCDH9Q9HC56 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
PCDH9Q9HC56 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms