Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6-693P-201ENST00000516134 107 ntBASIC1.1□□□□□ -2.23
POLR1BQ9H9Y6 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
POLR1BQ9H9Y6 AC134878.1-201ENST00000619901 243 ntBASIC1.1□□□□□ -2.23
POLR1BQ9H9Y6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AC008163.1-202ENST00000636004 2889 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 RNY4P28-201ENST00000365281 93 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 SNORA24-201ENST00000384096 131 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 SNORA40.5-201ENST00000391061 128 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 SNRPGP8-201ENST00000454064 226 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AC007751.1-201ENST00000529260 376 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 MIR6779-201ENST00000617283 64 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AC243994.1-201ENST00000618627 109 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.36-201ENST00000362602 112 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.66-201ENST00000362862 102 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 SNORA25.3-201ENST00000363205 127 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 SNORD61-201ENST00000384252 73 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 MIR518F-201ENST00000384973 87 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 RNU4-71P-201ENST00000516258 113 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 AL162730.1-201ENST00000605734 292 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 7SK.10-201ENST00000621414 298 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.199-201ENST00000364014 102 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 SNORD114-24-201ENST00000365029 72 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-728P-201ENST00000365375 104 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-463P-201ENST00000384340 107 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 MIR548A2-201ENST00000384956 97 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 MT-TT-201ENST00000387460 66 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 SNORA79-201ENST00000408376 140 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU4-43P-201ENST00000410628 137 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 snoU13.16-201ENST00000459350 104 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-1023P-201ENST00000516137 106 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 MIR4503-201ENST00000582187 83 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.121-201ENST00000363309 113 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 SNORD27-201ENST00000363981 72 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MTND1P19-201ENST00000511780 315 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MIR2115-201ENST00000516657 100 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-197P-201ENST00000516680 100 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-453P-201ENST00000516819 85 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AP003484.1-201ENST00000530974 250 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AC004817.2-201ENST00000561794 651 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MIR3149-201ENST00000584629 83 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AP000942.4-201ENST00000604811 241 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MTND1P7-201ENST00000632801 297 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 SNORD45.3-201ENST00000363836 72 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 MIR570-201ENST00000384917 97 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 MIR1302-7-201ENST00000408841 72 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 MIR4744-201ENST00000581563 82 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.539-201ENST00000384635 107 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 MT-TN-201ENST00000387400 73 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-938P-201ENST00000411285 103 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.65-201ENST00000362846 100 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.144-201ENST00000363521 113 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 SNORA20.1-201ENST00000364790 130 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 SNORA27-201ENST00000384323 126 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.542-201ENST00000384641 111 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 RNU7-73P-201ENST00000458743 63 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 RNU7-67P-201ENST00000459003 62 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 RNU7-53P-201ENST00000516705 60 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 MIR3128-201ENST00000581957 66 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 MIR6516-201ENST00000630554 81 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.447-201ENST00000384184 113 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 Y_RNA.626-201ENST00000411288 95 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 MIR548AO-201ENST00000579992 96 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 AC131055.1-201ENST00000584626 316 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 AC106800.4-201ENST00000614905 153 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms