Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MIR4804-201ENST00000581683 73 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 MIR4676-201ENST00000583078 72 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 AP000942.4-201ENST00000604811 241 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 snoU18.1-201ENST00000629629 71 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 AC010332.2-201ENST00000613083 1904 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 SNORA25.1-201ENST00000362326 128 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 RNU6-326P-201ENST00000365480 107 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.509-201ENST00000384506 99 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 SNORA53-201ENST00000391141 249 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MTCO2P12-201ENST00000427426 682 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MTND4LP30-201ENST00000454092 297 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MTCO2P24-201ENST00000515611 426 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 SNORD36C-201ENST00000516733 66 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 SNORA40.15-201ENST00000516884 107 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MIR4662B-201ENST00000579498 81 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MIR3612-201ENST00000579753 87 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 AL008718.3-201ENST00000610217 321 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MIR6740-201ENST00000618268 113 ntBASIC0.43□□□□□ -2.34
RPAP3Q9H6T3 MIR18A-201ENST00000362310 71 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.19-201ENST00000362462 99 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.24-201ENST00000362508 103 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.214-201ENST00000364201 112 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 RNU6-716P-201ENST00000365621 103 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 RNU6-514P-201ENST00000384208 107 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.527-201ENST00000384573 102 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 MIR518F-201ENST00000384973 87 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 RNU6-679P-201ENST00000391003 106 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 SNORA40.5-201ENST00000391061 128 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 MIR1197-201ENST00000408818 88 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 RNU7-73P-201ENST00000458743 63 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.42□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.64-201ENST00000362845 102 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 RNU6-770P-201ENST00000363929 105 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.210-201ENST00000364161 110 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.217-201ENST00000364214 105 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.380-201ENST00000365663 111 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 SNORD61-201ENST00000384252 73 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 MTND5P22-201ENST00000458380 195 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 RNU7-56P-201ENST00000458744 62 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.641-201ENST00000459414 105 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 RN7SKP12-201ENST00000516275 143 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 SCARNA24.2-201ENST00000516968 130 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 RNU6-988P-201ENST00000519081 107 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 AC100767.1-201ENST00000528178 123 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 AC037487.3-201ENST00000606668 112 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 MIR8055-201ENST00000610739 97 ntBASIC0.41□□□□□ -2.34
RPAP3Q9H6T3 MIR342-201ENST00000362212 99 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.216-201ENST00000364205 93 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 SNORA22B-201ENST00000383876 138 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 SNORA27-201ENST00000384323 126 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 SNORD38B-201ENST00000384690 67 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 MIR588-201ENST00000384900 83 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 MIR548A2-201ENST00000384956 97 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 MTATP6P23-201ENST00000440153 476 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 SNORA27.4-201ENST00000516650 95 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 AC131281.1-201ENST00000522984 164 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 AC008608.1-201ENST00000603910 127 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.802-201ENST00000614892 130 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 SNORD38B-202ENST00000625943 69 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 Z97988.1-201ENST00000637697 135 ntBASIC0.4□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.39□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.138-201ENST00000363462 102 ntBASIC0.39□□□□□ -2.35
RPAP3Q9H6T3 MIR526A2-201ENST00000390198 65 ntBASIC0.39□□□□□ -2.35
RPAP3Q9H6T3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.39□□□□□ -2.35
RPAP3Q9H6T3 MIR4514-201ENST00000581410 57 ntBASIC0.39□□□□□ -2.35
RPAP3Q9H6T3 AC006006.1-201ENST00000603082 144 ntBASIC0.39□□□□□ -2.35
RPAP3Q9H6T3 AL160413.1-201ENST00000622780 310 ntBASIC0.39□□□□□ -2.35
RPAP3Q9H6T3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 SNORA63C-201ENST00000364578 129 ntBASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 SNORD24-201ENST00000383884 75 ntBASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 RPS29P24-201ENST00000486345 171 ntBASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 RNU7-53P-201ENST00000516705 60 ntBASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 RNU6-365P-201ENST00000517113 106 ntBASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
RPAP3Q9H6T3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 RNU4-45P-201ENST00000365469 141 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 SNORD12C-201ENST00000386307 89 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 MIR938-201ENST00000401216 83 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 RNU6-602P-201ENST00000411155 105 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 AF228730.3-201ENST00000436691 102 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 MIR18B-201ENST00000454574 71 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 AL117351.2-201ENST00000513571 157 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 RNU6-126P-201ENST00000516685 103 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms