Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MIR5094-201ENST00000578766 85 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 AL442644.1-201ENST00000454390 3105 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 MIRLET7C-201ENST00000362160 84 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 SNORA63D-201ENST00000364359 132 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.440-201ENST00000384120 114 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 RNA5SP136-201ENST00000410906 107 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 RNA5SP247-201ENST00000411181 105 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 AC245047.3-201ENST00000429428 127 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 AL031737.1-201ENST00000450125 223 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 SNORA31.4-201ENST00000516049 129 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 RNVU1-2-201ENST00000516326 135 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 SNORA31.10-201ENST00000516482 106 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 MIR4419B-201ENST00000577260 68 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 MIR4287-201ENST00000579398 78 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 MIR5582-201ENST00000579697 68 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.77□□□□□ -2.13
EBF3Q9H4W6 AC134878.1-201ENST00000619901 243 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 U1.36-201ENST00000620684 176 ntBASIC1.77□□□□□ -2.13
EBF3Q9H4W6 SNORD115-28-201ENST00000363931 81 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 SNORD14E-201ENST00000364009 85 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 SNORA2.2-201ENST00000365473 135 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 RNU6-1189P-201ENST00000383958 107 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 RNU6-442P-201ENST00000383968 104 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 SNORD12C-201ENST00000386307 89 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
EBF3Q9H4W6 RNA5SP501-201ENST00000410990 112 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.76□□□□□ -2.13
EBF3Q9H4W6 COX6CP6-201ENST00000490840 228 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 RNU6-830P-201ENST00000516353 107 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 RNY4P20-201ENST00000516678 93 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 RNU7-28P-201ENST00000516759 62 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 HSPE1P19-201ENST00000603327 295 ntBASIC1.76□□□□□ -2.13
EBF3Q9H4W6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
EBF3Q9H4W6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
EBF3Q9H4W6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.348-201ENST00000365403 103 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 RNU6-32P-201ENST00000383948 107 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 RNU6-13P-201ENST00000384248 107 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 RNU6-905P-201ENST00000384434 107 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 RNU6-12P-201ENST00000384604 107 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 RNU6-1104P-201ENST00000384723 104 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 RNU6-41P-201ENST00000384741 107 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.75□□□□□ -2.13
EBF3Q9H4W6 HSPE1P9-201ENST00000440046 311 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 AC114811.1-201ENST00000507207 168 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.714-201ENST00000517065 90 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 AC022523.2-201ENST00000561045 150 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 MIR4781-201ENST00000585250 76 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 MIR8054-201ENST00000620877 86 ntBASIC1.75□□□□□ -2.13
EBF3Q9H4W6 AC245060.5-201ENST00000610778 3293 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 RNU6-640P-201ENST00000363693 105 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 MIR802-201ENST00000390235 94 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 RNU6-440P-201ENST00000390882 105 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 RNA5SP482-201ENST00000391269 118 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 AP1B1P2-201ENST00000416196 106 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 STAG3L5P-204ENST00000443759 179 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 RNU6-537P-201ENST00000517277 103 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
EBF3Q9H4W6 SNORA63.5-201ENST00000363548 123 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 RNU6-112P-201ENST00000363599 104 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.163-201ENST00000363702 113 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.328-201ENST00000365208 113 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 RNU6-690P-201ENST00000365242 106 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.362-201ENST00000365518 110 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 SNORA51.10-201ENST00000384418 136 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 MIR520A-201ENST00000384862 85 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 MIR676-201ENST00000390702 67 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 HMGN2P32-201ENST00000444648 269 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.677-201ENST00000516401 85 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 SUMO2P16-201ENST00000519475 264 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.73□□□□□ -2.13
EBF3Q9H4W6 AP003484.1-201ENST00000530974 250 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 AC015726.2-201ENST00000620112 122 ntBASIC1.73□□□□□ -2.13
EBF3Q9H4W6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
EBF3Q9H4W6 ICE2P2-201ENST00000483823 2787 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.242-201ENST00000364473 110 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.336-201ENST00000365307 109 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 SNORA4.2-201ENST00000365313 147 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 RNU6-296P-201ENST00000384608 107 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 RNU6-950P-201ENST00000384651 107 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.72□□□□□ -2.13
EBF3Q9H4W6 RPS29P24-201ENST00000486345 171 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 RNU6-412P-201ENST00000516434 106 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 RNU2-35P-201ENST00000516446 142 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 Y_RNA.694-201ENST00000516677 117 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.72□□□□□ -2.13
EBF3Q9H4W6 AC021443.1-201ENST00000604478 211 ntBASIC1.72□□□□□ -2.13
EBF3Q9H4W6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms