Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RNU6-888P-201ENST00000363010 101 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 RNU6-913P-201ENST00000390913 95 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 RNU2-70P-201ENST00000410718 179 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 Y_RNA.673-201ENST00000516306 88 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 AC004817.2-201ENST00000561794 651 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 RMST_2.1-201ENST00000617263 136 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 MIR6788-201ENST00000618842 66 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 MIR6734-201ENST00000621166 68 ntBASIC0.69□□□□□ -2.3
CCDC68Q9H2F9 RNU6-369P-201ENST00000362515 102 ntBASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 Y_RNA.237-201ENST00000364439 102 ntBASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 RNU6-740P-201ENST00000364734 105 ntBASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 RNU6-1109P-201ENST00000391187 107 ntBASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 AC015818.7-201ENST00000428754 109 ntBASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 AC087499.7-201ENST00000441958 109 ntBASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 RNU6-1153P-201ENST00000516760 105 ntBASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CCDC68Q9H2F9 SNORA63C-201ENST00000364578 129 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 RNU6-1227P-201ENST00000383981 107 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 MIR520H-201ENST00000385126 88 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 RNU2-55P-201ENST00000411146 174 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 MIR8055-201ENST00000610739 97 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 AP001282.2-201ENST00000616149 309 ntBASIC0.67□□□□□ -2.3
CCDC68Q9H2F9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 SNORA1.1-201ENST00000364671 133 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 MT-TT-201ENST00000387460 66 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 AF228730.3-201ENST00000436691 102 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 AL138752.1-201ENST00000452964 351 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 snoU13.18-201ENST00000459483 104 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 SNORA4-201ENST00000584302 138 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 Z83818.1-201ENST00000603584 150 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 Z97988.1-201ENST00000637697 135 ntBASIC0.66□□□□□ -2.3
CCDC68Q9H2F9 Y_RNA.7-201ENST00000362352 102 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.11-201ENST00000362375 109 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 RNY3P5-201ENST00000384127 102 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 HMGN1P33-201ENST00000432945 451 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.679-201ENST00000516416 91 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 RNU6-635P-201ENST00000516651 102 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.65□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.66-201ENST00000362862 102 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 RNU6-1309P-201ENST00000363305 108 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.199-201ENST00000364014 102 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.410-201ENST00000383992 113 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.422-201ENST00000384054 114 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.512-201ENST00000384518 102 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 MIR573-201ENST00000384964 99 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.590-201ENST00000410140 107 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 RNU2-11P-201ENST00000459191 187 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 RNU7-96P-201ENST00000459535 64 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 RNA5SP153-201ENST00000516498 76 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 U2.14-201ENST00000615943 113 ntBASIC0.64□□□□□ -2.31
CCDC68Q9H2F9 MIR342-201ENST00000362212 99 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 RNU6-238P-201ENST00000363313 106 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 RNU6-1189P-201ENST00000383958 107 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 RNU6-484P-201ENST00000384016 107 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 SNORD77.3-201ENST00000391113 65 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 AL606845.1-201ENST00000404881 255 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 RNU6-651P-201ENST00000411040 105 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 MIR4804-201ENST00000581683 73 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 MIR6740-201ENST00000618268 113 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 U6.104-201ENST00000637979 90 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 AC010332.2-201ENST00000613083 1904 ntBASIC0.63□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.82-201ENST00000363000 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.92-201ENST00000363043 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.235-201ENST00000364412 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.306-201ENST00000365015 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.312-201ENST00000365089 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.322-201ENST00000365151 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 MIR588-201ENST00000384900 83 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 MIR1302-6-201ENST00000408466 90 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 SNRPGP8-201ENST00000454064 226 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 SNORD2.1-201ENST00000458762 69 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.650-201ENST00000459002 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 MTATP8P1-201ENST00000467115 207 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 Y_RNA.777-201ENST00000516982 102 ntBASIC0.62□□□□□ -2.31
CCDC68Q9H2F9 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms