Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SCARNA4.1-201ENST00000628597 123 ntBASIC0.77□□□□□ -2.29
LCE3DQ9BYE3 MIR6830-201ENST00000636015 70 ntBASIC0.77□□□□□ -2.29
LCE3DQ9BYE3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
LCE3DQ9BYE3 AC096644.4-201ENST00000563417 2912 ntBASIC0.77□□□□□ -2.29
LCE3DQ9BYE3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LCE3DQ9BYE3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 MIR302D-201ENST00000362275 68 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 SNORD33-201ENST00000362761 85 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.98-201ENST00000363109 102 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNU6-1134P-201ENST00000365156 101 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 SNORA9.2-201ENST00000365361 133 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 DEFA7P-201ENST00000382676 285 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNU6-949P-201ENST00000384040 107 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 SNORA32-201ENST00000384072 121 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 SNORA7.4-201ENST00000384249 137 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNU6-813P-201ENST00000384691 107 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNY1P7-201ENST00000384743 110 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 SNORD67-201ENST00000390833 111 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNU6-644P-201ENST00000391155 98 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.593-201ENST00000410292 98 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 HSPE1P24-201ENST00000450782 238 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNA5SP233-201ENST00000459153 113 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RN7SL385P-201ENST00000468873 276 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNU7-61P-201ENST00000515897 61 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RNU7-41P-201ENST00000515917 61 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.659-201ENST00000515994 113 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.685-201ENST00000516532 108 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AP003327.1-201ENST00000529684 127 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 MIR3198-2-201ENST00000577868 80 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AC062037.1-201ENST00000605302 128 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AC067747.1-201ENST00000608026 250 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 MIR8074-201ENST00000615081 81 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AL590808.1-201ENST00000618696 141 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 MIR7641-1-201ENST00000627518 61 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AL512310.12-203ENST00000640543 90 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AC009093.8-201ENST00000641769 292 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 AC008163.1-202ENST00000636004 2889 ntBASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
LCE3DQ9BYE3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 MIR6073-201ENST00000352083 89 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.17-201ENST00000362433 111 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.173-201ENST00000363776 113 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.219-201ENST00000364232 113 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNU6-865P-201ENST00000364772 107 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNY1P2-201ENST00000364820 117 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNU6-497P-201ENST00000365316 104 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.388-201ENST00000383919 113 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNU6-851P-201ENST00000384565 107 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 MT-TF-201ENST00000387314 71 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 MIR1302-7-201ENST00000408841 72 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNA5SP181-201ENST00000410246 98 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNU4-47P-201ENST00000410876 114 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 AC009474.2-201ENST00000451383 136 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNU7-48P-201ENST00000458875 63 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 snoU13.2-201ENST00000459201 104 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RN7SL863P-201ENST00000462370 296 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RPL30P7-201ENST00000479312 323 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 UBL5P1-201ENST00000507979 193 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 AC234781.5-201ENST00000508429 271 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNU7-79P-201ENST00000516082 62 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNU6-795P-201ENST00000516323 103 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 SNORD67.1-201ENST00000516618 108 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 MIR2115-201ENST00000516657 100 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 SNORA44.1-201ENST00000517031 108 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 AP003716.2-201ENST00000528260 108 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 AC141846.1-201ENST00000568348 142 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 AC008745.1-201ENST00000604064 271 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 MIR376B-201ENST00000614515 100 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 ZYXP1-201ENST00000617638 118 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 AP001362.1-201ENST00000625165 124 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 RNA5SP196-201ENST00000625967 102 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 AC091304.10-201ENST00000641554 121 ntBASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
LCE3DQ9BYE3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LCE3DQ9BYE3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
LCE3DQ9BYE3 AC073325.2-201ENST00000339545 159 ntBASIC0.74□□□□□ -2.29
LCE3DQ9BYE3 RNA5SP393-201ENST00000363423 117 ntBASIC0.74□□□□□ -2.29
LCE3DQ9BYE3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.74□□□□□ -2.29
LCE3DQ9BYE3 RNA5SP72-201ENST00000364442 117 ntBASIC0.74□□□□□ -2.29
LCE3DQ9BYE3 RNY1P13-201ENST00000365030 105 ntBASIC0.74□□□□□ -2.29
LCE3DQ9BYE3 RNU6-396P-201ENST00000365369 105 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms