Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 RNU5E-4P-201ENST00000364931 120 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 RNU6-867P-201ENST00000364956 107 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 SNORD24-201ENST00000383884 75 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 SNORD61-201ENST00000384252 73 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 SNORA27-201ENST00000384323 126 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 Y_RNA.535-201ENST00000384612 99 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 SNORA8.3-201ENST00000384679 139 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 RNU6-1237P-201ENST00000384777 107 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 MIR518F-201ENST00000384973 87 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 RNU7-53P-201ENST00000516705 60 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 RNA5SP480-201ENST00000516840 109 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 RNU6-1270P-201ENST00000517128 108 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 DEFB108E-201ENST00000524692 240 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 PVT1_3.1-201ENST00000620853 95 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 MIR6513-201ENST00000621188 64 ntBASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.47□□□□□ -2.33
NDUFAF3Q9BU61 Y_RNA.61-201ENST00000362835 102 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.216-201ENST00000364205 93 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 SNORA63C-201ENST00000364578 129 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-913P-201ENST00000390913 95 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 RPS29P24-201ENST00000486345 171 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 SERF1AP1-201ENST00000514575 187 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-504P-201ENST00000516568 104 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 SCARNA24.2-201ENST00000516968 130 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 MIR4680-201ENST00000580906 66 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 MIR4804-201ENST00000581683 73 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 MIR4676-201ENST00000583078 72 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 MIR3171-201ENST00000584270 74 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 MIR8055-201ENST00000610739 97 ntBASIC0.46□□□□□ -2.34
NDUFAF3Q9BU61 UBE2WP1-201ENST00000362030 340 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.84-201ENST00000363011 104 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-211P-201ENST00000384047 107 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 SNORD36C-201ENST00000516733 66 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 AC004812.1-201ENST00000540773 146 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 AC020891.4-201ENST00000605745 93 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 Z97988.1-201ENST00000637697 135 ntBASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.229-201ENST00000364347 113 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.393-201ENST00000383936 102 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-1289P-201ENST00000384431 106 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.572-201ENST00000384757 98 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 MIR548A2-201ENST00000384956 97 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 AC113618.1-201ENST00000416747 285 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 MTND5P22-201ENST00000458380 195 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 RN7SL793P-201ENST00000583259 296 ntBASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.44□□□□□ -2.34
NDUFAF3Q9BU61 AC010332.2-201ENST00000613083 1904 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-888P-201ENST00000363010 101 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 SNORD114-26-201ENST00000363543 72 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.202-201ENST00000364083 110 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 SNORA1.1-201ENST00000364671 133 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 MIR626-201ENST00000385032 94 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 HMGN1P33-201ENST00000432945 451 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 MIR18B-201ENST00000454574 71 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-1299P-201ENST00000516316 100 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-1338P-201ENST00000516328 91 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 AC020661.2-201ENST00000560114 134 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 MIR3612-201ENST00000579753 87 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 AL162730.1-201ENST00000605734 292 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 MIR6740-201ENST00000618268 113 ntBASIC0.43□□□□□ -2.34
NDUFAF3Q9BU61 MIR18A-201ENST00000362310 71 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-1309P-201ENST00000363305 108 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.153-201ENST00000363615 91 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 RNU4-45P-201ENST00000365469 141 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 RNY1P4-201ENST00000384595 115 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 MIR588-201ENST00000384900 83 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 SNORA26-201ENST00000391286 122 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 MIR938-201ENST00000401216 83 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 RNU2-70P-201ENST00000410718 179 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 AL138752.1-201ENST00000452964 351 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 RNU7-56P-201ENST00000458744 62 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 uc_338.6-201ENST00000613544 171 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.42□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.275-201ENST00000364726 110 ntBASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 MIR7-2-201ENST00000384970 110 ntBASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-1203P-201ENST00000410703 110 ntBASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 RNU2-55P-201ENST00000411146 174 ntBASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 AF228730.3-201ENST00000436691 102 ntBASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 RNU7-96P-201ENST00000459535 64 ntBASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 RNU6-1137P-201ENST00000517073 99 ntBASIC0.41□□□□□ -2.34
NDUFAF3Q9BU61 Y_RNA.7-201ENST00000362352 102 ntBASIC0.4□□□□□ -2.35
NDUFAF3Q9BU61 Y_RNA.117-201ENST00000363294 101 ntBASIC0.4□□□□□ -2.35
NDUFAF3Q9BU61 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms