Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL365205.2-201ENST00000594586 68 ntBASIC1.45□□□□□ -2.18
PAAF1Q9BRP4 MIR8065-201ENST00000620577 100 ntBASIC1.45□□□□□ -2.18
PAAF1Q9BRP4 AC008133.2-201ENST00000624540 351 ntBASIC1.45□□□□□ -2.18
PAAF1Q9BRP4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
PAAF1Q9BRP4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 MIR342-201ENST00000362212 99 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 Y_RNA.8-201ENST00000362353 102 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-34-201ENST00000362441 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-12-201ENST00000362583 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-29-201ENST00000362834 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-9-201ENST00000362912 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-21-201ENST00000362963 81 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-14-201ENST00000363090 81 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-13-201ENST00000363358 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-41-201ENST00000363608 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-11-201ENST00000363616 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-5-201ENST00000363633 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-39-201ENST00000363694 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-4-201ENST00000363810 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-16-201ENST00000363887 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-6-201ENST00000363942 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-42-201ENST00000364273 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-15-201ENST00000364809 81 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-1-201ENST00000364961 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-26-201ENST00000365067 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-10-201ENST00000365073 81 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-43-201ENST00000365503 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-36-201ENST00000365629 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORA70.7-201ENST00000384159 133 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORA27-201ENST00000384323 126 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORA51.10-201ENST00000384418 136 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 Y_RNA.555-201ENST00000384673 110 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD77.3-201ENST00000391113 65 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 RNA5SP127-201ENST00000411051 133 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 RPS26P48-201ENST00000491713 339 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 RNU7-70P-201ENST00000516941 66 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 SNORD115-40-201ENST00000606510 82 ntBASIC1.44□□□□□ -2.18
PAAF1Q9BRP4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 AL442644.1-201ENST00000454390 3105 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 RNU6-597P-201ENST00000365620 102 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 Y_RNA.441-201ENST00000384123 112 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 MIR1287-201ENST00000408492 90 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 RNU6-1135P-201ENST00000411083 103 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 RNU1-98P-201ENST00000458992 160 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 MIR4791-201ENST00000607666 84 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 AL096861.1-201ENST00000610899 123 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 AC243994.1-201ENST00000618627 109 ntBASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PAAF1Q9BRP4 RNA5SP48-201ENST00000363969 126 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 RNU6-938P-201ENST00000411285 103 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 RNU6-958P-201ENST00000516995 106 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 DNAJC19P2-201ENST00000593340 302 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 MIR4251-201ENST00000635819 61 ntBASIC1.42□□□□□ -2.18
PAAF1Q9BRP4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 RNU6-449P-201ENST00000383914 107 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 SNORD116-18-201ENST00000383961 92 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 RNU6-209P-201ENST00000384118 107 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 SNORA75.5-201ENST00000391291 81 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 RPS29P24-201ENST00000486345 171 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 RNU6-165P-201ENST00000517170 99 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 MIR3646-201ENST00000578301 84 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 MIR3192-201ENST00000584920 77 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.41□□□□□ -2.18
PAAF1Q9BRP4 MIR302B-201ENST00000362188 73 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 RNU6-818P-201ENST00000364837 108 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 MIR624-201ENST00000385217 97 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 AL133373.1-201ENST00000497098 94 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 MIR5197-201ENST00000583721 112 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 AC091895.1-201ENST00000624494 256 ntBASIC1.4□□□□□ -2.19
PAAF1Q9BRP4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 RNU6-151P-201ENST00000364158 107 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 RNU6-804P-201ENST00000384286 107 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 PCNPP3-201ENST00000393579 471 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 MIR1276-201ENST00000408707 83 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 RNU6-588P-201ENST00000410281 105 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 AL035398.1-201ENST00000430869 322 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 RNU7-80P-201ENST00000459562 61 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 RNU7-121P-201ENST00000516604 62 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 RNU7-53P-201ENST00000516705 60 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 MIR3658-201ENST00000636291 56 ntBASIC1.39□□□□□ -2.19
PAAF1Q9BRP4 SNORA25.3-201ENST00000363205 127 ntBASIC1.38□□□□□ -2.19
PAAF1Q9BRP4 Y_RNA.180-201ENST00000363867 113 ntBASIC1.38□□□□□ -2.19
PAAF1Q9BRP4 RNU6-1082P-201ENST00000364574 107 ntBASIC1.38□□□□□ -2.19
PAAF1Q9BRP4 SNORA25.9-201ENST00000365087 128 ntBASIC1.38□□□□□ -2.19
PAAF1Q9BRP4 MIR499A-201ENST00000384903 122 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms