Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR125B2-201ENST00000385128 89 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 MIR526A2-201ENST00000390198 65 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 RNU6-679P-201ENST00000391003 106 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 SNORA53-201ENST00000391141 249 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 MIR1257-201ENST00000408490 117 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 SNORD100-201ENST00000408573 76 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 MIR1252-201ENST00000408861 65 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 RNU6-101P-201ENST00000410323 104 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 RNU6-121P-201ENST00000410525 99 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 SNORD36C-201ENST00000516733 66 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS35Q96QK1 AC090897.1-201ENST00000580909 226 ntBASIC0.28□□□□□ -2.36
VPS35Q96QK1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS35Q96QK1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
VPS35Q96QK1 Y_RNA.389-201ENST00000383924 113 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 SNORD61-201ENST00000384252 73 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 RNU6-602P-201ENST00000411155 105 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 RNU7-102P-201ENST00000458948 62 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 snoU13.2-201ENST00000459201 104 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 RNU7-185P-201ENST00000459215 60 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 RNU6-126P-201ENST00000516685 103 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 SNORA40.15-201ENST00000516884 107 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS35Q96QK1 AC008608.1-201ENST00000603910 127 ntBASIC0.27□□□□□ -2.37
VPS35Q96QK1 RNU6-888P-201ENST00000363010 101 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-326P-201ENST00000365480 107 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 Y_RNA.431-201ENST00000384086 102 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-747P-201ENST00000390928 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-241P-201ENST00000391148 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-447P-201ENST00000410293 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-355P-201ENST00000410427 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-791P-201ENST00000410467 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-705P-201ENST00000410601 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-860P-201ENST00000410860 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 SNORD71-201ENST00000411292 86 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-785P-201ENST00000411324 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-365P-201ENST00000517113 106 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 Y_RNA.721-201ENST00000517207 102 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 AC100767.1-201ENST00000528178 123 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 AL008718.3-201ENST00000610217 321 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 U6.90-201ENST00000614007 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 U6.70-201ENST00000620287 104 ntBASIC0.26□□□□□ -2.37
VPS35Q96QK1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 Y_RNA.217-201ENST00000364214 105 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 RNU4-10P-201ENST00000364383 140 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 Y_RNA.419-201ENST00000384041 102 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 MIR548I3-201ENST00000408378 149 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.25□□□□□ -2.37
VPS35Q96QK1 Y_RNA.641-201ENST00000459414 105 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 Y_RNA.631-201ENST00000459607 101 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 RNA5SP94-201ENST00000516917 108 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 RN7SL793P-201ENST00000583259 296 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 AC006006.1-201ENST00000603082 144 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 AC010487.4-201ENST00000637027 61 ntBASIC0.25□□□□□ -2.37
VPS35Q96QK1 MIR103A1-201ENST00000362165 78 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 AL138752.1-201ENST00000452964 351 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 RNU7-96P-201ENST00000459535 64 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 RNU7-156P-201ENST00000517214 74 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 SNORD92-201ENST00000585078 85 ntBASIC0.24□□□□□ -2.37
VPS35Q96QK1 MIR215-201ENST00000384858 110 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 MIR563-201ENST00000385080 79 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 MT-TF-201ENST00000387314 71 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS35Q96QK1 RNU2-11P-201ENST00000459191 187 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 RNU6-998P-201ENST00000515894 101 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 RNU6-504P-201ENST00000516568 104 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 SNORA27.4-201ENST00000516650 95 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 AP003733.2-201ENST00000529409 171 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 MIR5688-201ENST00000580619 83 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 uc_338.16-201ENST00000621804 95 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 snoU18.1-201ENST00000629629 71 ntBASIC0.23□□□□□ -2.37
VPS35Q96QK1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 Y_RNA.28-201ENST00000362554 111 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 Y_RNA.380-201ENST00000365663 111 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 SNORD12C-201ENST00000386307 89 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 SNORD77.3-201ENST00000391113 65 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 AC022028.1-201ENST00000412054 408 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 RPL21P38-201ENST00000418090 167 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 AL731563.1-201ENST00000442202 214 ntBASIC0.22□□□□□ -2.37
VPS35Q96QK1 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms