Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 Y_RNA.494-201ENST00000384432 111 ntBASIC2.66□□□□□ -1.98
SYNGAP1Q96PV0 AC069257.2-201ENST00000441819 155 ntBASIC2.66□□□□□ -1.98
SYNGAP1Q96PV0 RNU2-11P-201ENST00000459191 187 ntBASIC2.66□□□□□ -1.98
SYNGAP1Q96PV0 AC107297.1-201ENST00000459991 176 ntBASIC2.66□□□□□ -1.98
SYNGAP1Q96PV0 RNU6-295P-201ENST00000516901 104 ntBASIC2.66□□□□□ -1.98
SYNGAP1Q96PV0 AL162726.3-218ENST00000636401 95 ntBASIC2.66□□□□□ -1.98
SYNGAP1Q96PV0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SYNGAP1Q96PV0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SYNGAP1Q96PV0 SNORA26.2-201ENST00000390922 122 ntBASIC2.65□□□□□ -1.99
SYNGAP1Q96PV0 RNU7-45P-201ENST00000459460 63 ntBASIC2.65□□□□□ -1.99
SYNGAP1Q96PV0 TRMT112P2-201ENST00000512910 132 ntBASIC2.65□□□□□ -1.99
SYNGAP1Q96PV0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.65□□□□□ -1.99
SYNGAP1Q96PV0 RNA5SP168-201ENST00000516642 112 ntBASIC2.65□□□□□ -1.99
SYNGAP1Q96PV0 MIRLET7C-201ENST00000362160 84 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 Y_RNA.220-201ENST00000364244 109 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 SNORA4.2-201ENST00000365313 147 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 RNY1P7-201ENST00000384743 110 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 MIR1302-4-201ENST00000408701 150 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 RPS3AP1-201ENST00000413190 320 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 AL512326.2-201ENST00000426359 151 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 RNU7-96P-201ENST00000459535 64 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 IGLV3-17-201ENST00000519099 244 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 AC027279.3-201ENST00000625055 122 ntBASIC2.64□□□□□ -1.99
SYNGAP1Q96PV0 MIR378A-201ENST00000362177 66 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 Y_RNA.155-201ENST00000363632 101 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 RNU6-950P-201ENST00000384651 107 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 Y_RNA.558-201ENST00000384685 113 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 U8.13-201ENST00000390842 128 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 AC093850.1-201ENST00000454121 251 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 RNU7-67P-201ENST00000459003 62 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 RNU7-34P-201ENST00000459394 64 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 RNU6-998P-201ENST00000515894 101 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 DEFB131E-201ENST00000532329 154 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 MIR6873-201ENST00000622788 63 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 AC021613.1-201ENST00000623880 111 ntBASIC2.63□□□□□ -1.99
SYNGAP1Q96PV0 RNU4-36P-201ENST00000364294 144 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 MIR488-201ENST00000365739 83 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 Y_RNA.507-201ENST00000384500 99 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 Y_RNA.531-201ENST00000384589 121 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 MIR1912-201ENST00000410389 80 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 RNA5SP144-201ENST00000410846 116 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 SUMO1P4-201ENST00000429430 302 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 RNU6-958P-201ENST00000516995 106 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 AC004812.1-201ENST00000540773 146 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 AC131280.1-202ENST00000624067 4211 ntBASIC2.62□□□□□ -1.99
SYNGAP1Q96PV0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 MIR21-201ENST00000362134 72 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-34-201ENST00000362441 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-12-201ENST00000362583 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-29-201ENST00000362834 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-9-201ENST00000362912 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-21-201ENST00000362963 81 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-14-201ENST00000363090 81 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-13-201ENST00000363358 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-41-201ENST00000363608 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-11-201ENST00000363616 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-5-201ENST00000363633 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-39-201ENST00000363694 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-4-201ENST00000363810 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-16-201ENST00000363887 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-6-201ENST00000363942 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-42-201ENST00000364273 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-15-201ENST00000364809 81 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-1-201ENST00000364961 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-26-201ENST00000365067 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-10-201ENST00000365073 81 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-43-201ENST00000365503 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 Y_RNA.370-201ENST00000365589 108 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-36-201ENST00000365629 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 RNU6-762P-201ENST00000517107 102 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 FAM71BP1-201ENST00000604431 523 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 SNORD115-40-201ENST00000606510 82 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 Y_RNA.818-201ENST00000618813 71 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 MIR2052-201ENST00000636055 55 ntBASIC2.61□□□□□ -1.99
SYNGAP1Q96PV0 RNU1-148P-201ENST00000384472 162 ntBASIC2.6□□□□□ -1.99
SYNGAP1Q96PV0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SYNGAP1Q96PV0 RNU7-113P-201ENST00000459273 62 ntBASIC2.6□□□□□ -1.99
SYNGAP1Q96PV0 RNU6-904P-201ENST00000516206 101 ntBASIC2.6□□□□□ -1.99
SYNGAP1Q96PV0 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
SYNGAP1Q96PV0 RNY3P2-201ENST00000362918 102 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 Y_RNA.107-201ENST00000363190 121 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 RNU6-833P-201ENST00000363486 107 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 SNORA1.2-201ENST00000365189 134 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 RNY4P29-201ENST00000410801 97 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 POLR2J4-204ENST00000418424 324 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 MTATP8P2-201ENST00000435212 202 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 AC113410.1-201ENST00000505029 247 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 AL137847.3-201ENST00000611521 109 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -2
SYNGAP1Q96PV0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
SYNGAP1Q96PV0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
SYNGAP1Q96PV0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms